Experiment: m.b. Dimethyl Sulfoxide 9 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1512 and HP15_1513 are separated by 84 nucleotides HP15_1513 and HP15_1514 are separated by 272 nucleotides
HP15_1512: HP15_1512 - Enoyl-CoA hydratase (EC 4.2.1.17) (from data) , at 1,588,416 to 1,590,563
_1512
HP15_1513: HP15_1513 - Acetyl-CoA C-acyltransferase (EC 2.3.1.16) (from data) , at 1,590,648 to 1,591,772
_1513
HP15_1514: HP15_1514 - DNA topoisomerase I, at 1,592,045 to 1,594,687
_1514
Position (kb)
1590
1591
1592 Strain fitness (log2 ratio)
-1
0
1 at 1589.753 kb on + strand, within HP15_1512 at 1589.778 kb on - strand, within HP15_1512 at 1589.858 kb on + strand, within HP15_1512 at 1590.042 kb on - strand, within HP15_1512 at 1590.429 kb on - strand at 1590.481 kb on + strand at 1590.491 kb on + strand at 1590.600 kb on - strand at 1590.601 kb on + strand at 1590.645 kb on + strand at 1590.653 kb on - strand at 1590.728 kb on - strand at 1590.741 kb on - strand at 1590.768 kb on + strand, within HP15_1513 at 1590.786 kb on - strand, within HP15_1513 at 1590.795 kb on + strand, within HP15_1513 at 1590.973 kb on - strand, within HP15_1513 at 1591.103 kb on + strand, within HP15_1513 at 1591.204 kb on + strand, within HP15_1513 at 1591.255 kb on - strand, within HP15_1513 at 1591.358 kb on + strand, within HP15_1513 at 1591.487 kb on - strand, within HP15_1513 at 1591.487 kb on - strand, within HP15_1513 at 1591.550 kb on + strand, within HP15_1513 at 1591.626 kb on + strand, within HP15_1513 at 1591.629 kb on - strand, within HP15_1513 at 1591.656 kb on - strand, within HP15_1513 at 1591.674 kb on - strand at 1591.739 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 9 vol% remove 1,589,753 + HP15_1512 0.62 -0.0 1,589,778 - HP15_1512 0.63 -0.0 1,589,858 + HP15_1512 0.67 -0.3 1,590,042 - HP15_1512 0.76 +0.3 1,590,429 - +0.7 1,590,481 + +1.1 1,590,491 + -0.1 1,590,600 - -0.7 1,590,601 + -0.3 1,590,645 + +0.7 1,590,653 - +1.7 1,590,728 - -1.0 1,590,741 - +0.5 1,590,768 + HP15_1513 0.11 -0.1 1,590,786 - HP15_1513 0.12 -0.2 1,590,795 + HP15_1513 0.13 +0.6 1,590,973 - HP15_1513 0.29 -0.0 1,591,103 + HP15_1513 0.40 -0.1 1,591,204 + HP15_1513 0.49 +0.6 1,591,255 - HP15_1513 0.54 +0.5 1,591,358 + HP15_1513 0.63 +1.0 1,591,487 - HP15_1513 0.75 -1.2 1,591,487 - HP15_1513 0.75 +0.5 1,591,550 + HP15_1513 0.80 +0.1 1,591,626 + HP15_1513 0.87 +0.1 1,591,629 - HP15_1513 0.87 -0.8 1,591,656 - HP15_1513 0.90 +0.2 1,591,674 - -0.2 1,591,739 - -0.5
Or see this region's nucleotide sequence