Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c14770
Experiment: m.b. Polymyxin B sulfate 0.0032 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | m.b. Polymyxin B sulfate 0.0032 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 1,528,957 | - | PGA1_c14760 | 0.41 | -0.2 | |
| 1,529,660 | + | +1.0 | |||
| 1,529,716 | + | +2.3 | |||
| 1,529,753 | - | -1.4 | |||
| 1,529,805 | + | +2.5 | |||
| 1,529,898 | + | +2.3 | |||
| 1,530,026 | + | PGA1_c14770 | 0.15 | -0.5 | |
| 1,530,026 | + | PGA1_c14770 | 0.15 | +2.0 | |
| 1,530,034 | - | PGA1_c14770 | 0.16 | +2.7 | |
| 1,530,034 | - | PGA1_c14770 | 0.16 | +0.7 | |
| 1,530,074 | + | PGA1_c14770 | 0.20 | -2.4 | |
| 1,530,358 | + | PGA1_c14770 | 0.48 | +1.4 | |
| 1,530,363 | + | PGA1_c14770 | 0.48 | -1.7 | |
| 1,530,371 | - | PGA1_c14770 | 0.49 | +0.2 | |
| 1,530,443 | + | PGA1_c14770 | 0.56 | +1.3 | |
| 1,530,451 | - | PGA1_c14770 | 0.57 | -1.2 | |
| 1,530,487 | - | PGA1_c14770 | 0.60 | +2.2 | |
| 1,530,532 | - | PGA1_c14770 | 0.65 | +1.5 | |
| 1,530,661 | - | PGA1_c14770 | 0.78 | +1.1 | |
| 1,530,731 | - | PGA1_c14770 | 0.85 | -1.8 | |
| 1,530,785 | - | PGA1_c14770 | 0.90 | +2.8 | |
| 1,530,892 | + | +1.5 |
Or see this region's nucleotide sequence