Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c13200

Experiment: m.b. Polymyxin B sulfate 0.0032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 0.0032 mg/ml
1,364,823	+				-2.9
1,364,831	-				+1.3
1,364,831	-				+3.0
1,364,833	+				+1.3
1,364,841	-				-0.8
1,364,842	-				-1.4
1,364,869	+				-3.1
1,364,869	+				+1.6
1,364,869	+				+0.2
1,364,877	-				-2.2
1,364,877	-				+2.6
1,364,902	-				+2.1
1,364,919	-				+1.0
1,364,953	-		PGA1_c13190	0.12	+1.4
1,364,957	+		PGA1_c13190	0.13	+2.2
1,364,957	+		PGA1_c13190	0.13	-1.3
1,364,960	-		PGA1_c13190	0.13	-1.8
1,364,965	-		PGA1_c13190	0.14	+0.5
1,364,970	-		PGA1_c13190	0.14	-2.8
1,365,061	-		PGA1_c13190	0.25	+2.9
1,365,082	+		PGA1_c13190	0.28	-0.8
1,365,083	+		PGA1_c13190	0.28	-1.4
1,365,119	+		PGA1_c13190	0.32	-2.4
1,365,141	+		PGA1_c13190	0.35	+1.5
1,365,145	+		PGA1_c13190	0.35	+2.4
1,365,149	+		PGA1_c13190	0.36	-1.9
1,365,172	-		PGA1_c13190	0.39	-1.3
1,365,199	+		PGA1_c13190	0.42	+1.4
1,365,199	+		PGA1_c13190	0.42	-0.7
1,365,199	+		PGA1_c13190	0.42	-2.7
1,365,207	-		PGA1_c13190	0.43	+0.7
1,365,310	+		PGA1_c13190	0.55	-2.1
1,365,364	-		PGA1_c13190	0.62	+0.7
1,365,551	+		PGA1_c13190	0.84	-1.7
1,365,559	-		PGA1_c13190	0.85	-1.4
1,365,561	+		PGA1_c13190	0.85	+2.2
1,365,569	+		PGA1_c13190	0.86	+1.6
1,365,580	+		PGA1_c13190	0.88	-2.5
1,365,580	+		PGA1_c13190	0.88	+1.4
1,365,590	+		PGA1_c13190	0.89	-0.6
1,365,590	+		PGA1_c13190	0.89	+1.8
1,365,626	+				-1.6
1,365,626	+				-1.5
1,365,626	+				+1.7
1,365,626	+				+1.7
1,365,626	+				+1.9
1,365,626	+				-1.0
1,365,626	+				-1.3
1,365,626	+				+1.8
1,365,626	+				-0.9
1,365,634	-				+0.6
1,365,634	-				-2.0
1,365,634	-				-2.8
1,365,634	-				+1.4
1,365,634	-				+2.1
1,365,634	-				-0.9
1,365,634	-				+1.1
1,365,639	-				+0.4
1,365,649	-				-0.3
1,365,690	+				+2.6
1,365,826	+		PGA1_c13200	0.16	-2.1
1,365,849	+		PGA1_c13200	0.18	+2.2
1,365,995	+		PGA1_c13200	0.35	+1.9
1,365,995	+		PGA1_c13200	0.35	+0.3
1,366,003	-		PGA1_c13200	0.36	-0.6
1,366,003	-		PGA1_c13200	0.36	-1.4
1,366,003	-		PGA1_c13200	0.36	+1.7
1,366,039	+		PGA1_c13200	0.40	+0.2
1,366,047	-		PGA1_c13200	0.41	-3.2
1,366,100	+		PGA1_c13200	0.47	+0.3
1,366,100	+		PGA1_c13200	0.47	+3.5
1,366,103	+		PGA1_c13200	0.48	+1.4
1,366,117	+		PGA1_c13200	0.49	-1.4
1,366,197	+		PGA1_c13200	0.58	-2.0
1,366,311	-		PGA1_c13200	0.72	-1.2
1,366,344	-		PGA1_c13200	0.75	-1.0
1,366,347	+		PGA1_c13200	0.76	-1.4
1,366,355	-		PGA1_c13200	0.77	+2.7
1,366,401	+		PGA1_c13200	0.82	-1.4
1,366,411	+		PGA1_c13200	0.83	-0.7
1,366,411	+		PGA1_c13200	0.83	+0.8
1,366,424	-		PGA1_c13200	0.85	-1.0
1,366,427	+		PGA1_c13200	0.85	-2.5
1,366,480	-				-0.0
1,366,629	+				+1.6
1,366,633	-				+0.7
1,366,653	+				-1.8
1,366,661	-				+0.1
1,366,688	+				-0.7
1,366,705	-				+3.8
1,366,717	+				+1.5
1,366,778	-				+2.1
1,366,778	-				+1.3
1,366,778	-				+2.7
1,366,784	+				+1.6
1,366,821	-		PGA1_c13210	0.11	+0.0
1,366,868	-		PGA1_c13210	0.15	-1.6
1,366,889	-		PGA1_c13210	0.17	+1.3
1,366,913	-		PGA1_c13210	0.18	+1.5
1,366,920	-		PGA1_c13210	0.19	+1.0
1,366,928	-		PGA1_c13210	0.20	+0.3
1,366,991	+		PGA1_c13210	0.24	-2.6
1,366,991	+		PGA1_c13210	0.24	-1.5
1,366,999	-		PGA1_c13210	0.25	-0.6
1,366,999	-		PGA1_c13210	0.25	-3.1
1,367,021	+		PGA1_c13210	0.27	-0.2
1,367,111	-		PGA1_c13210	0.34	-1.8
1,367,212	+		PGA1_c13210	0.41	+3.5
1,367,212	+		PGA1_c13210	0.41	-1.0
1,367,322	+		PGA1_c13210	0.50	+1.1
1,367,330	-		PGA1_c13210	0.50	-1.9
1,367,402	-		PGA1_c13210	0.56	+0.9
1,367,510	-		PGA1_c13210	0.64	+1.0