Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c12660

Experiment: m.b. Polymyxin B sulfate 0.0032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 0.0032 mg/ml
1,310,072	+		PGA1_c12650	0.19	+1.4
1,310,132	+		PGA1_c12650	0.24	-0.1
1,310,218	-		PGA1_c12650	0.31	+2.1
1,310,241	-		PGA1_c12650	0.33	-2.8
1,310,244	-		PGA1_c12650	0.33	-2.1
1,310,261	-		PGA1_c12650	0.34	+1.8
1,310,263	+		PGA1_c12650	0.35	-1.9
1,310,301	+		PGA1_c12650	0.38	-1.8
1,310,301	+		PGA1_c12650	0.38	+3.0
1,310,301	+		PGA1_c12650	0.38	-1.4
1,310,309	-		PGA1_c12650	0.38	+2.5
1,310,309	-		PGA1_c12650	0.38	-1.7
1,310,315	+		PGA1_c12650	0.39	-2.0
1,310,315	+		PGA1_c12650	0.39	-2.0
1,310,315	+		PGA1_c12650	0.39	+3.0
1,310,323	-		PGA1_c12650	0.40	-0.7
1,310,323	-		PGA1_c12650	0.40	-1.1
1,310,323	-		PGA1_c12650	0.40	-3.0
1,310,323	-		PGA1_c12650	0.40	-0.4
1,310,328	-		PGA1_c12650	0.40	+3.0
1,310,329	+		PGA1_c12650	0.40	+1.0
1,310,404	+		PGA1_c12650	0.46	-2.7
1,310,404	+		PGA1_c12650	0.46	+1.9
1,310,404	+		PGA1_c12650	0.46	+2.5
1,310,422	+		PGA1_c12650	0.48	-0.9
1,310,464	+		PGA1_c12650	0.51	+1.6
1,310,527	-		PGA1_c12650	0.57	+1.9
1,310,555	+		PGA1_c12650	0.59	+1.5
1,310,563	-		PGA1_c12650	0.60	-2.5
1,310,578	+		PGA1_c12650	0.61	+0.4
1,310,630	+		PGA1_c12650	0.65	-2.0
1,310,683	+		PGA1_c12650	0.69	-0.9
1,310,727	-		PGA1_c12650	0.73	-2.1
1,310,757	-		PGA1_c12650	0.76	+2.7
1,310,789	+		PGA1_c12650	0.78	+1.3
1,310,825	-		PGA1_c12650	0.81	-2.3
1,310,833	+		PGA1_c12650	0.82	-2.9
1,310,917	+		PGA1_c12650	0.89	+2.1
1,310,925	-		PGA1_c12650	0.90	+2.0
1,310,931	+				+1.8
1,310,931	+				-1.6
1,310,931	+				+3.4
1,310,939	-				-0.8
1,310,939	-				+2.2
1,310,992	+				+0.5
1,311,000	-				-1.1
1,311,071	-				+1.1
1,311,099	+				-1.4
1,311,321	+		PGA1_c12660	0.26	+1.5
1,311,420	-		PGA1_c12660	0.36	+1.6
1,311,423	+		PGA1_c12660	0.36	+2.0
1,311,423	+		PGA1_c12660	0.36	-0.8
1,311,431	-		PGA1_c12660	0.37	-2.1
1,311,431	-		PGA1_c12660	0.37	-1.1
1,311,440	+		PGA1_c12660	0.38	-3.3
1,311,441	-		PGA1_c12660	0.38	+2.6
1,311,446	+		PGA1_c12660	0.38	+0.8
1,311,529	+		PGA1_c12660	0.46	-0.0
1,311,557	+		PGA1_c12660	0.49	-1.1
1,311,581	+		PGA1_c12660	0.52	-1.7
1,311,584	-		PGA1_c12660	0.52	-1.9
1,311,656	+		PGA1_c12660	0.59	+1.4
1,311,656	+		PGA1_c12660	0.59	+1.8
1,311,671	-		PGA1_c12660	0.60	-0.3
1,311,672	+		PGA1_c12660	0.60	-2.2
1,311,731	+		PGA1_c12660	0.66	-1.9
1,311,806	+		PGA1_c12660	0.74	+0.5
1,311,806	+		PGA1_c12660	0.74	-2.1
1,311,814	-		PGA1_c12660	0.74	+1.3
1,311,814	-		PGA1_c12660	0.74	+1.6
1,311,838	+		PGA1_c12660	0.77	+2.1
1,311,983	+				-1.4
1,311,998	+				-0.9
1,312,019	+				-1.7
1,312,026	+				+1.7
1,312,086	-				+0.6
1,312,097	-				-1.9
1,312,131	-				-2.1
1,312,169	+				-1.7
1,312,215	+				-1.8
1,312,215	+				+1.1
1,312,215	+				+0.1
1,312,256	+				-1.6
1,312,295	+				+0.6
1,312,317	-				-2.3
1,312,341	-				+2.3
1,312,389	+		PGA1_c12670	0.12	-1.7
1,312,477	+		PGA1_c12670	0.18	+1.3
1,312,477	+		PGA1_c12670	0.18	+2.0
1,312,477	+		PGA1_c12670	0.18	+1.5
1,312,485	-		PGA1_c12670	0.19	+1.9
1,312,485	-		PGA1_c12670	0.19	-2.3
1,312,517	-		PGA1_c12670	0.21	-2.4
1,312,517	-		PGA1_c12670	0.21	-2.5
1,312,548	-		PGA1_c12670	0.24	-3.4
1,312,662	+		PGA1_c12670	0.32	+1.6
1,312,662	-		PGA1_c12670	0.32	-0.7
1,312,668	+		PGA1_c12670	0.33	+3.6
1,312,676	-		PGA1_c12670	0.33	-0.8
1,312,681	+		PGA1_c12670	0.34	+0.0
1,312,686	+		PGA1_c12670	0.34	-0.9
1,312,704	-		PGA1_c12670	0.35	-2.2
1,312,749	-		PGA1_c12670	0.39	-1.0
1,312,750	+		PGA1_c12670	0.39	+1.5
1,312,758	-		PGA1_c12670	0.39	+1.4
1,312,768	+		PGA1_c12670	0.40	-2.0
1,312,820	+		PGA1_c12670	0.44	-1.5
1,312,820	+		PGA1_c12670	0.44	+1.6
1,312,820	+		PGA1_c12670	0.44	+3.0
1,312,828	-		PGA1_c12670	0.44	-0.0
1,312,828	-		PGA1_c12670	0.44	+1.3
1,312,897	-		PGA1_c12670	0.50	-0.7
1,312,954	-		PGA1_c12670	0.54	+2.6
1,312,986	+		PGA1_c12670	0.56	-0.2
1,313,003	-		PGA1_c12670	0.57	-2.3
1,313,069	-		PGA1_c12670	0.62	+2.9