Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c12480

Experiment: m.b. Polymyxin B sulfate 0.0032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 0.0032 mg/ml
1,294,807	-		PGA1_c12470	0.21	-2.1
1,294,829	-		PGA1_c12470	0.23	+2.0
1,294,835	+		PGA1_c12470	0.23	+2.3
1,294,845	-		PGA1_c12470	0.24	-1.2
1,294,882	-		PGA1_c12470	0.27	+1.2
1,294,882	-		PGA1_c12470	0.27	-2.0
1,294,884	+		PGA1_c12470	0.27	-1.7
1,294,892	-		PGA1_c12470	0.28	-0.4
1,294,928	-		PGA1_c12470	0.31	-0.1
1,294,930	+		PGA1_c12470	0.31	+2.6
1,294,930	+		PGA1_c12470	0.31	-1.7
1,294,938	-		PGA1_c12470	0.31	-2.7
1,294,949	-		PGA1_c12470	0.32	-0.1
1,294,959	-		PGA1_c12470	0.33	+1.5
1,295,014	-		PGA1_c12470	0.37	+0.8
1,295,024	-		PGA1_c12470	0.38	-0.8
1,295,034	+		PGA1_c12470	0.39	+2.6
1,295,034	+		PGA1_c12470	0.39	-2.0
1,295,034	+		PGA1_c12470	0.39	-1.9
1,295,034	+		PGA1_c12470	0.39	-2.6
1,295,042	-		PGA1_c12470	0.39	-0.8
1,295,042	-		PGA1_c12470	0.39	-0.4
1,295,047	+		PGA1_c12470	0.40	+3.5
1,295,081	+		PGA1_c12470	0.43	+2.9
1,295,102	+		PGA1_c12470	0.44	-2.2
1,295,104	-		PGA1_c12470	0.44	-1.7
1,295,104	-		PGA1_c12470	0.44	-1.7
1,295,127	-		PGA1_c12470	0.46	-0.9
1,295,142	+		PGA1_c12470	0.47	-1.2
1,295,189	+		PGA1_c12470	0.51	+1.3
1,295,237	-		PGA1_c12470	0.55	+2.4
1,295,254	+		PGA1_c12470	0.56	+1.6
1,295,259	+		PGA1_c12470	0.57	-2.4
1,295,262	-		PGA1_c12470	0.57	+2.1
1,295,324	+		PGA1_c12470	0.62	-2.2
1,295,332	-		PGA1_c12470	0.62	-0.4
1,295,332	-		PGA1_c12470	0.62	-2.0
1,295,332	-		PGA1_c12470	0.62	+1.8
1,295,355	-		PGA1_c12470	0.64	+3.1
1,295,386	-		PGA1_c12470	0.67	-2.7
1,295,386	-		PGA1_c12470	0.67	+1.9
1,295,437	+		PGA1_c12470	0.71	-0.7
1,295,445	-		PGA1_c12470	0.71	+0.8
1,295,447	+		PGA1_c12470	0.71	-0.0
1,295,447	+		PGA1_c12470	0.71	-2.3
1,295,455	-		PGA1_c12470	0.72	+1.9
1,295,485	+		PGA1_c12470	0.74	+0.5
1,295,505	+		PGA1_c12470	0.76	+0.1
1,295,505	+		PGA1_c12470	0.76	-2.0
1,295,505	+		PGA1_c12470	0.76	+1.1
1,295,510	+		PGA1_c12470	0.76	+1.5
1,295,510	+		PGA1_c12470	0.76	-2.5
1,295,510	+		PGA1_c12470	0.76	-0.6
1,295,513	-		PGA1_c12470	0.76	-0.3
1,295,513	-		PGA1_c12470	0.76	-1.6
1,295,518	-		PGA1_c12470	0.77	+1.0
1,295,562	+		PGA1_c12470	0.80	-0.2
1,295,616	+		PGA1_c12470	0.85	-1.1
1,295,626	+		PGA1_c12470	0.85	+0.3
1,295,644	+		PGA1_c12470	0.87	+2.1
1,295,650	-		PGA1_c12470	0.87	-3.0
1,295,753	-				-1.8
1,295,755	+				+2.5
1,295,755	+				+2.7
1,295,755	+				-2.7
1,295,763	-				-1.5
1,295,834	+				+5.2
1,295,945	-		PGA1_c12480	0.14	+1.0
1,295,947	+		PGA1_c12480	0.14	-1.6
1,295,947	+		PGA1_c12480	0.14	+1.0
1,295,947	+		PGA1_c12480	0.14	+1.4
1,295,950	-		PGA1_c12480	0.15	+1.7
1,295,955	-		PGA1_c12480	0.15	-1.2
1,295,955	-		PGA1_c12480	0.15	+1.8
1,295,966	+		PGA1_c12480	0.16	-2.1
1,295,983	+		PGA1_c12480	0.18	-1.0
1,296,119	-		PGA1_c12480	0.31	-2.5
1,296,129	-		PGA1_c12480	0.32	-1.5
1,296,129	-		PGA1_c12480	0.32	+2.6
1,296,136	-		PGA1_c12480	0.32	-1.0
1,296,138	+		PGA1_c12480	0.33	+1.5
1,296,173	+		PGA1_c12480	0.36	+0.9
1,296,244	-		PGA1_c12480	0.43	-2.0
1,296,272	-		PGA1_c12480	0.45	-2.3
1,296,286	-		PGA1_c12480	0.47	-1.9
1,296,321	+		PGA1_c12480	0.50	-3.1
1,296,343	+		PGA1_c12480	0.52	+2.8
1,296,481	+		PGA1_c12480	0.65	+4.9
1,296,567	+		PGA1_c12480	0.74	+0.7
1,296,645	+		PGA1_c12480	0.81	-1.9
1,296,700	+		PGA1_c12480	0.86	+3.9
1,296,700	+		PGA1_c12480	0.86	+3.3
1,296,806	-				+3.2
1,296,817	-				+0.1
1,296,839	+				-1.5
1,296,847	-				-1.1
1,296,861	-				-2.8
1,296,862	-				-0.7
1,296,864	+				-1.5
1,296,895	-				-2.3
1,296,933	+				-0.5
1,296,951	+				-0.5
1,297,034	-				+2.7
1,297,187	+		PGA1_c12490	0.15	+0.9
1,297,187	+		PGA1_c12490	0.15	-1.7
1,297,187	+		PGA1_c12490	0.15	+0.8
1,297,187	+		PGA1_c12490	0.15	+1.4
1,297,187	+		PGA1_c12490	0.15	+2.3
1,297,187	+		PGA1_c12490	0.15	-1.1
1,297,195	-		PGA1_c12490	0.15	-0.7
1,297,248	-		PGA1_c12490	0.19	+2.4
1,297,248	-		PGA1_c12490	0.19	+3.4
1,297,315	-		PGA1_c12490	0.25	+1.2
1,297,318	+		PGA1_c12490	0.25	+2.5
1,297,338	+		PGA1_c12490	0.27	+0.0
1,297,352	+		PGA1_c12490	0.28	-2.7
1,297,424	-		PGA1_c12490	0.33	-1.2
1,297,429	-		PGA1_c12490	0.34	-1.2
1,297,480	+		PGA1_c12490	0.38	-1.0
1,297,539	+		PGA1_c12490	0.43	-2.9
1,297,558	+		PGA1_c12490	0.44	-1.0
1,297,621	+		PGA1_c12490	0.49	+2.1
1,297,621	+		PGA1_c12490	0.49	-2.0
1,297,621	+		PGA1_c12490	0.49	+1.7
1,297,629	-		PGA1_c12490	0.50	-0.1
1,297,663	-		PGA1_c12490	0.53	-1.5
1,297,688	-		PGA1_c12490	0.55	-2.4
1,297,738	-		PGA1_c12490	0.59	-1.9
1,297,742	-		PGA1_c12490	0.59	+1.1