Strain Fitness in Pantoea sp. MT58 around IAI47_12560

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50
2,643,153	+				+0.9
2,643,154	-				-0.5
2,643,170	+				+0.2
2,643,171	-				-0.8
2,643,173	-				+1.0
2,643,208	+				+0.2
2,643,209	-				+0.9
2,643,209	-				+1.0
2,643,209	-				-1.0
2,643,209	-				+0.6
2,643,230	+				+1.4
2,643,230	+				+1.8
2,643,230	+				-0.1
2,643,230	+				+0.7
2,643,230	+				+0.3
2,643,230	+				+1.1
2,643,231	-				+1.4
2,643,231	-				+1.7
2,643,231	-				+0.6
2,643,231	-				-1.6
2,643,231	-				+1.2
2,643,231	-				-1.2
2,643,234	-				-0.8
2,643,234	-				-0.4
2,643,242	+				+0.9
2,643,243	-				-0.2
2,643,243	-				-0.2
2,643,243	-				-0.8
2,643,243	-				+0.5
2,643,243	-				+0.2
2,643,250	+				+1.4
2,643,250	+				+2.7
2,643,250	+				+3.0
2,643,251	-				+1.8
2,643,251	-				+1.1
2,643,251	-				-1.1
2,643,251	-				-0.3
2,643,251	-				+1.5
2,643,312	-		IAI47_12550	0.17	-0.2
2,643,313	+		IAI47_12550	0.17	+1.0
2,643,416	+		IAI47_12550	0.34	+0.3
2,643,416	+		IAI47_12550	0.34	+1.2
2,643,416	+		IAI47_12550	0.34	+1.4
2,643,416	+		IAI47_12550	0.34	+0.2
2,643,417	-		IAI47_12550	0.35	-0.1
2,643,417	-		IAI47_12550	0.35	+0.2
2,643,428	-		IAI47_12550	0.36	-0.0
2,643,428	-		IAI47_12550	0.36	-1.4
2,643,428	-		IAI47_12550	0.36	+0.5
2,643,544	+		IAI47_12550	0.56	+1.0
2,643,544	+		IAI47_12550	0.56	-1.1
2,643,545	-		IAI47_12550	0.56	+0.8
2,643,545	-		IAI47_12550	0.56	+1.0
2,643,545	-		IAI47_12550	0.56	+2.1
2,643,557	-		IAI47_12550	0.58	-0.9
2,643,580	+		IAI47_12550	0.62	+0.2
2,643,580	+		IAI47_12550	0.62	+0.8
2,643,580	+		IAI47_12550	0.62	+0.3
2,643,580	+		IAI47_12550	0.62	-0.4
2,643,580	+		IAI47_12550	0.62	+1.2
2,643,580	+		IAI47_12550	0.62	+0.6
2,643,581	-		IAI47_12550	0.62	-0.4
2,643,581	-		IAI47_12550	0.62	-2.5
2,643,581	-		IAI47_12550	0.62	+1.6
2,643,581	-		IAI47_12550	0.62	-1.3
2,643,581	-		IAI47_12550	0.62	-0.1
2,643,581	-		IAI47_12550	0.62	+0.5
2,643,581	-		IAI47_12550	0.62	+1.2
2,643,581	-		IAI47_12550	0.62	+0.3
2,643,583	+		IAI47_12550	0.62	+0.9
2,643,583	+		IAI47_12550	0.62	+1.1
2,643,583	+		IAI47_12550	0.62	+0.8
2,643,583	+		IAI47_12550	0.62	+0.0
2,643,583	+		IAI47_12550	0.62	+0.9
2,643,583	+		IAI47_12550	0.62	+0.4
2,643,583	+		IAI47_12550	0.62	+0.3
2,643,583	+		IAI47_12550	0.62	+1.2
2,643,583	+		IAI47_12550	0.62	+2.0
2,643,583	+		IAI47_12550	0.62	-1.5
2,643,583	+		IAI47_12550	0.62	-1.1
2,643,584	-		IAI47_12550	0.62	+0.8
2,643,584	-		IAI47_12550	0.62	+0.6
2,643,584	-		IAI47_12550	0.62	-0.9
2,643,584	-		IAI47_12550	0.62	-0.9
2,643,584	-		IAI47_12550	0.62	-1.8
2,643,631	+		IAI47_12550	0.70	-0.3
2,643,631	+		IAI47_12550	0.70	-0.4
2,643,662	-		IAI47_12550	0.76	+0.5
2,643,662	-		IAI47_12550	0.76	+0.6
2,643,689	+		IAI47_12550	0.80	+1.1
2,643,690	-		IAI47_12550	0.80	-0.3
2,643,690	-		IAI47_12550	0.80	-0.4
2,643,733	+		IAI47_12550	0.87	+0.3
2,643,733	+		IAI47_12550	0.87	-0.8
2,643,733	+		IAI47_12550	0.87	+2.0
2,643,734	-		IAI47_12550	0.88	-0.5
2,643,734	-		IAI47_12550	0.88	-0.5
2,643,734	-		IAI47_12550	0.88	+0.2
2,643,751	+				+0.9
2,643,751	+				-0.4
2,643,752	-				-0.2
2,643,811	+				+0.1
2,643,812	-				+2.8
2,643,812	-				-0.5
2,643,812	-				-0.9
2,643,827	+				+0.1
2,643,828	-				-0.3
2,643,828	-				-2.8
2,643,833	+				+0.0
2,643,833	+				-0.5
2,643,834	-				+1.7
2,643,834	-				-0.8
2,643,834	-				+1.0
2,643,834	-				-0.0
2,643,884	+		IAI47_12555	0.24	+0.6
2,643,884	+		IAI47_12555	0.24	-0.8
2,643,884	+		IAI47_12555	0.24	+1.8
2,643,884	+		IAI47_12555	0.24	+1.1
2,643,884	+		IAI47_12555	0.24	+0.7
2,643,884	+		IAI47_12555	0.24	-1.0
2,643,884	+		IAI47_12555	0.24	+0.7
2,643,885	-		IAI47_12555	0.25	+0.0
2,643,885	-		IAI47_12555	0.25	+1.0
2,643,885	-		IAI47_12555	0.25	-0.1
2,643,885	-		IAI47_12555	0.25	-0.7
2,643,885	-		IAI47_12555	0.25	+0.1
2,643,927	+		IAI47_12555	0.43	+0.0
2,644,007	+		IAI47_12555	0.77	+0.9
2,644,007	+		IAI47_12555	0.77	-0.3
2,644,008	-		IAI47_12555	0.78	+0.2
2,644,031	+		IAI47_12555	0.88	+1.2
2,644,031	+		IAI47_12555	0.88	+0.0
2,644,031	+		IAI47_12555	0.88	-0.6
2,644,031	+		IAI47_12555	0.88	+0.6
2,644,031	+		IAI47_12555	0.88	+1.2
2,644,032	-		IAI47_12555	0.88	+1.1
2,644,039	+				+1.2
2,644,039	+				+0.4
2,644,046	+				+0.5
2,644,046	+				+0.1
2,644,046	+				-0.0
2,644,047	-				+1.7
2,644,047	-				+1.0
2,644,047	-				-0.3
2,644,047	-				-1.2
2,644,047	-				-2.5
2,644,092	+				-0.5
2,644,107	+				-0.1
2,644,107	+				+0.3
2,644,107	+				+0.0
2,644,108	-				+0.4
2,644,108	-				-0.8
2,644,108	-				+0.2
2,644,108	-				+0.5
2,644,108	-				+2.1
2,644,108	-				-0.1
2,644,108	-				-0.3
2,644,108	-				+1.0
2,644,108	-				-2.7
2,644,112	+				+1.5
2,644,112	+				+0.1
2,644,112	+				-1.1
2,644,112	+				-1.7
2,644,112	+				+0.7
2,644,112	+				+0.1
2,644,112	+				+0.5
2,644,112	+				-1.0
2,644,113	-				+1.4
2,644,113	-				+0.5
2,644,113	-				-0.6
2,644,113	-				-0.9
2,644,113	-				+2.8
2,644,113	-				+0.4
2,644,113	-				+1.1
2,644,113	-				+1.4
2,644,122	+				+0.6
2,644,122	+				-1.6
2,644,123	-				-1.8
2,644,133	+				-1.0
2,644,133	+				-1.3
2,644,268	-		IAI47_12560	0.11	-0.9
2,644,268	-		IAI47_12560	0.11	-1.3
2,644,295	+		IAI47_12560	0.13	-0.4
2,644,328	+		IAI47_12560	0.16	+0.5
2,644,328	+		IAI47_12560	0.16	+1.2
2,644,340	+		IAI47_12560	0.17	+0.9
2,644,340	+		IAI47_12560	0.17	+0.1
2,644,340	+		IAI47_12560	0.17	+1.2
2,644,340	+		IAI47_12560	0.17	+1.7
2,644,396	-		IAI47_12560	0.21	+0.4
2,644,396	-		IAI47_12560	0.21	-0.3
2,644,398	+		IAI47_12560	0.21	-0.4
2,644,398	+		IAI47_12560	0.21	+0.5
2,644,398	+		IAI47_12560	0.21	-1.0
2,644,399	-		IAI47_12560	0.21	-1.0
2,644,399	-		IAI47_12560	0.21	+1.1
2,644,399	-		IAI47_12560	0.21	+0.3
2,644,418	+		IAI47_12560	0.22	+0.6
2,644,418	+		IAI47_12560	0.22	-0.5
2,644,419	-		IAI47_12560	0.22	+0.2
2,644,419	-		IAI47_12560	0.22	-0.7
2,644,419	-		IAI47_12560	0.22	-0.2
2,644,438	-		IAI47_12560	0.24	-2.1
2,644,470	+		IAI47_12560	0.26	-1.3
2,644,489	+		IAI47_12560	0.27	+0.2
2,644,489	+		IAI47_12560	0.27	+0.6
2,644,489	+		IAI47_12560	0.27	-0.0
2,644,489	+		IAI47_12560	0.27	+1.9
2,644,490	-		IAI47_12560	0.27	+0.2
2,644,490	-		IAI47_12560	0.27	-0.9
2,644,490	-		IAI47_12560	0.27	+0.2
2,644,490	-		IAI47_12560	0.27	-0.3
2,644,490	-		IAI47_12560	0.27	+1.1
2,644,490	-		IAI47_12560	0.27	+1.4
2,644,490	-		IAI47_12560	0.27	+0.5
2,644,519	-		IAI47_12560	0.30	-0.5
2,644,521	+		IAI47_12560	0.30	+0.9
2,644,521	+		IAI47_12560	0.30	-0.6
2,644,521	+		IAI47_12560	0.30	+1.2
2,644,522	-		IAI47_12560	0.30	-0.2
2,644,522	-		IAI47_12560	0.30	+0.7
2,644,522	-		IAI47_12560	0.30	-1.2
2,644,522	-		IAI47_12560	0.30	+1.8
2,644,538	-		IAI47_12560	0.31	-0.9
2,644,547	+		IAI47_12560	0.32	-1.3
2,644,547	+		IAI47_12560	0.32	+2.5
2,644,547	+		IAI47_12560	0.32	-0.3
2,644,547	+		IAI47_12560	0.32	-1.0
2,644,548	-		IAI47_12560	0.32	+1.5
2,644,548	-		IAI47_12560	0.32	+0.2
2,644,548	-		IAI47_12560	0.32	-0.9
2,644,548	-		IAI47_12560	0.32	+0.4
2,644,589	+		IAI47_12560	0.35	+0.7
2,644,589	+		IAI47_12560	0.35	+0.1
2,644,589	+		IAI47_12560	0.35	+1.1
2,644,589	+		IAI47_12560	0.35	-0.3
2,644,590	+		IAI47_12560	0.35	+0.2
2,644,590	-		IAI47_12560	0.35	+0.5
2,644,590	-		IAI47_12560	0.35	+0.3
2,644,670	+		IAI47_12560	0.41	+1.0
2,644,671	-		IAI47_12560	0.41	+0.2
2,644,671	-		IAI47_12560	0.41	-1.2
2,644,671	-		IAI47_12560	0.41	+0.8
2,644,671	-		IAI47_12560	0.41	+0.6
2,644,671	-		IAI47_12560	0.41	-1.0
2,644,671	-		IAI47_12560	0.41	-0.3
2,644,672	+		IAI47_12560	0.41	+0.4
2,644,673	-		IAI47_12560	0.41	-0.3
2,644,775	+		IAI47_12560	0.48	-1.1
2,644,776	-		IAI47_12560	0.48	-1.4
2,644,776	-		IAI47_12560	0.48	-2.3
2,644,776	-		IAI47_12560	0.48	-0.3
2,644,779	+		IAI47_12560	0.48	+1.1
2,644,779	+		IAI47_12560	0.48	-0.6
2,644,779	+		IAI47_12560	0.48	+0.6
2,644,779	+		IAI47_12560	0.48	+0.1
2,644,779	+		IAI47_12560	0.48	-1.5
2,644,779	+		IAI47_12560	0.48	-0.1
2,644,780	-		IAI47_12560	0.49	+0.5
2,644,780	-		IAI47_12560	0.49	-0.3
2,644,780	-		IAI47_12560	0.49	-1.1
2,644,780	-		IAI47_12560	0.49	+0.8
2,644,780	-		IAI47_12560	0.49	+0.1
2,644,785	-		IAI47_12560	0.49	+1.2
2,644,922	+		IAI47_12560	0.59	+2.5
2,644,923	-		IAI47_12560	0.59	+0.2
2,644,927	+		IAI47_12560	0.59	+0.0
2,644,927	+		IAI47_12560	0.59	+1.5
2,644,928	-		IAI47_12560	0.59	-0.7
2,644,928	-		IAI47_12560	0.59	-2.0
2,644,928	-		IAI47_12560	0.59	-2.4
2,644,953	-		IAI47_12560	0.61	-0.8
2,645,139	+		IAI47_12560	0.75	-0.2
2,645,139	+		IAI47_12560	0.75	+0.7
2,645,139	+		IAI47_12560	0.75	+0.2
2,645,140	-		IAI47_12560	0.75	-0.2
2,645,140	-		IAI47_12560	0.75	-1.4
2,645,140	-		IAI47_12560	0.75	+0.7
2,645,184	+		IAI47_12560	0.78	-0.8
2,645,184	+		IAI47_12560	0.78	+1.2
2,645,184	+		IAI47_12560	0.78	-2.3
2,645,184	+		IAI47_12560	0.78	+0.6
2,645,185	-		IAI47_12560	0.78	+0.7
2,645,185	-		IAI47_12560	0.78	+0.4
2,645,187	+		IAI47_12560	0.78	-0.0
2,645,187	+		IAI47_12560	0.78	-1.3
2,645,188	-		IAI47_12560	0.78	-0.3
2,645,221	-		IAI47_12560	0.81	-0.6
2,645,221	-		IAI47_12560	0.81	+0.3
2,645,221	-		IAI47_12560	0.81	+0.6
2,645,221	-		IAI47_12560	0.81	-0.4
2,645,221	-		IAI47_12560	0.81	+1.6
2,645,271	+		IAI47_12560	0.84	+0.1
2,645,271	+		IAI47_12560	0.84	+0.4
2,645,272	-		IAI47_12560	0.84	-0.7
2,645,272	-		IAI47_12560	0.84	+0.1
2,645,318	+		IAI47_12560	0.88	+1.2
2,645,318	+		IAI47_12560	0.88	+1.9
2,645,319	-		IAI47_12560	0.88	-0.2
2,645,319	-		IAI47_12560	0.88	+0.1
2,645,415	+				-0.0
2,645,415	+				+1.0
2,645,415	+				-0.6
2,645,441	+				+1.2
2,645,501	+				+2.6
2,645,502	-				+0.3
2,645,530	+				-0.3
2,645,530	+				-1.8
2,645,531	-				-0.4
2,645,531	-				-0.4
2,645,531	-				+0.2
2,645,534	-				+2.2
2,645,534	-				+0.5
2,645,534	-				+3.8
2,645,543	+				-1.0
2,645,544	-				-0.7
2,645,544	-				+0.2
2,645,544	-				-0.6
2,645,544	-				+0.1
2,645,554	+				+0.0
2,645,554	+				+1.1
2,645,554	+				-0.4
2,645,555	-				+1.1
2,645,555	-				+1.1
2,645,555	-				+1.0
2,645,555	-				+1.4
2,645,609	+				-1.2
2,645,610	-				+0.3
2,645,714	+				-0.3
2,645,714	+				-0.2
2,645,714	+				-0.8
2,645,715	-				-0.6
2,645,715	-				+1.0
2,645,766	-		IAI47_12565	0.13	-0.5
2,645,766	-		IAI47_12565	0.13	+0.8
2,645,766	-		IAI47_12565	0.13	+0.0
2,645,847	-		IAI47_12565	0.18	+0.1
2,646,094	+		IAI47_12565	0.33	-0.3
2,646,095	-		IAI47_12565	0.33	-1.3
2,646,095	-		IAI47_12565	0.33	+0.4
2,646,100	+		IAI47_12565	0.34	-0.7
2,646,100	+		IAI47_12565	0.34	-0.6
2,646,100	+		IAI47_12565	0.34	+0.8
2,646,100	+		IAI47_12565	0.34	-0.7
2,646,100	+		IAI47_12565	0.34	-1.4
2,646,100	+		IAI47_12565	0.34	-1.6
2,646,100	+		IAI47_12565	0.34	-0.2
2,646,100	+		IAI47_12565	0.34	-0.5
2,646,100	+		IAI47_12565	0.34	+0.3
2,646,100	+		IAI47_12565	0.34	-0.2
2,646,100	+		IAI47_12565	0.34	-0.9
2,646,101	-		IAI47_12565	0.34	-0.9
2,646,101	-		IAI47_12565	0.34	+0.0
2,646,101	-		IAI47_12565	0.34	+2.0
2,646,101	-		IAI47_12565	0.34	-1.1
2,646,101	-		IAI47_12565	0.34	-0.3
2,646,184	+		IAI47_12565	0.39	-1.5
2,646,184	+		IAI47_12565	0.39	+0.6
2,646,185	-		IAI47_12565	0.39	+0.4
2,646,185	-		IAI47_12565	0.39	-1.4
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