Strain Fitness in Pantoea sp. MT58 around IAI47_10660

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50
2,253,906	-		IAI47_10655	0.49	-1.7
2,253,906	-		IAI47_10655	0.49	+0.9
2,254,038	+		IAI47_10655	0.57	-0.4
2,254,038	+		IAI47_10655	0.57	+0.1
2,254,038	+		IAI47_10655	0.57	+1.6
2,254,038	+		IAI47_10655	0.57	-0.7
2,254,038	+		IAI47_10655	0.57	+2.9
2,254,038	+		IAI47_10655	0.57	-0.6
2,254,039	-		IAI47_10655	0.57	+0.5
2,254,039	-		IAI47_10655	0.57	+0.2
2,254,041	+		IAI47_10655	0.57	+1.7
2,254,041	+		IAI47_10655	0.57	+0.9
2,254,042	-		IAI47_10655	0.57	+0.6
2,254,042	-		IAI47_10655	0.57	-0.1
2,254,104	+		IAI47_10655	0.61	+1.5
2,254,283	-		IAI47_10655	0.71	-1.0
2,254,313	+		IAI47_10655	0.72	-1.0
2,254,314	-		IAI47_10655	0.72	-0.0
2,254,326	+		IAI47_10655	0.73	+0.2
2,254,326	+		IAI47_10655	0.73	+2.4
2,254,327	-		IAI47_10655	0.73	+0.4
2,254,484	+		IAI47_10655	0.82	-0.4
2,254,484	+		IAI47_10655	0.82	-0.2
2,254,484	+		IAI47_10655	0.82	+1.4
2,254,484	+		IAI47_10655	0.82	+1.9
2,254,565	+		IAI47_10655	0.86	+0.1
2,254,565	+		IAI47_10655	0.86	-0.8
2,254,565	+		IAI47_10655	0.86	-0.2
2,254,565	+		IAI47_10655	0.86	+1.4
2,254,565	+		IAI47_10655	0.86	-0.1
2,254,566	-		IAI47_10655	0.86	+0.1
2,254,566	-		IAI47_10655	0.86	+0.8
2,254,566	-		IAI47_10655	0.86	-0.3
2,254,566	-		IAI47_10655	0.86	+1.9
2,254,566	-		IAI47_10655	0.86	+0.8
2,254,566	-		IAI47_10655	0.86	+1.1
2,254,566	-		IAI47_10655	0.86	+0.7
2,254,566	-		IAI47_10655	0.86	-0.7
2,254,609	+		IAI47_10655	0.89	-1.6
2,254,609	+		IAI47_10655	0.89	+0.9
2,254,610	-		IAI47_10655	0.89	+0.3
2,254,810	+				+1.2
2,254,811	-				-0.5
2,254,883	+				+0.0
2,254,914	-				-0.1
2,254,914	-				+1.7
2,254,914	-				-0.1
2,254,914	-				-1.1
2,254,914	-				-0.4
2,254,914	-				+0.8
2,254,959	-				+0.3
2,255,074	+		IAI47_10660	0.11	-0.5
2,255,080	+		IAI47_10660	0.11	-0.1
2,255,080	+		IAI47_10660	0.11	+1.3
2,255,080	+		IAI47_10660	0.11	+0.5
2,255,080	+		IAI47_10660	0.11	+0.7
2,255,081	-		IAI47_10660	0.11	-0.8
2,255,081	-		IAI47_10660	0.11	-1.3
2,255,081	-		IAI47_10660	0.11	-1.3
2,255,081	-		IAI47_10660	0.11	+2.4
2,255,120	-		IAI47_10660	0.12	+0.5
2,255,120	-		IAI47_10660	0.12	-0.8
2,255,144	+		IAI47_10660	0.13	-0.1
2,255,144	+		IAI47_10660	0.13	+2.3
2,255,145	-		IAI47_10660	0.13	-0.6
2,255,153	+		IAI47_10660	0.14	-0.2
2,255,154	-		IAI47_10660	0.14	-0.3
2,255,280	-		IAI47_10660	0.19	+0.3
2,255,288	-		IAI47_10660	0.19	+0.6
2,255,337	+		IAI47_10660	0.21	-0.9
2,255,433	-		IAI47_10660	0.25	+0.4
2,255,482	+		IAI47_10660	0.27	+0.5
2,255,482	+		IAI47_10660	0.27	+0.6
2,255,483	-		IAI47_10660	0.27	-0.4
2,255,483	-		IAI47_10660	0.27	-1.4
2,255,591	+		IAI47_10660	0.31	+1.5
2,255,591	+		IAI47_10660	0.31	+0.9
2,255,604	+		IAI47_10660	0.32	+0.6
2,255,605	-		IAI47_10660	0.32	-2.1
2,255,605	-		IAI47_10660	0.32	-0.8
2,255,605	-		IAI47_10660	0.32	-0.4
2,255,605	-		IAI47_10660	0.32	+0.2
2,255,630	+		IAI47_10660	0.33	+0.1
2,255,631	-		IAI47_10660	0.33	-0.9
2,255,631	-		IAI47_10660	0.33	-1.2
2,255,631	-		IAI47_10660	0.33	-0.7
2,255,713	+		IAI47_10660	0.36	+0.7
2,255,713	+		IAI47_10660	0.36	+1.5
2,255,713	+		IAI47_10660	0.36	-0.1
2,255,714	-		IAI47_10660	0.36	-0.4
2,255,714	-		IAI47_10660	0.36	-0.6
2,255,714	-		IAI47_10660	0.36	+0.1
2,255,774	+		IAI47_10660	0.38	+0.5
2,255,774	+		IAI47_10660	0.38	-0.8
2,255,775	-		IAI47_10660	0.38	-1.1
2,255,775	-		IAI47_10660	0.38	-0.9
2,255,832	+		IAI47_10660	0.41	-0.4
2,255,833	-		IAI47_10660	0.41	+0.1
2,255,874	+		IAI47_10660	0.42	-0.9
2,255,975	+		IAI47_10660	0.46	+0.8
2,255,984	+		IAI47_10660	0.47	+0.4
2,255,985	-		IAI47_10660	0.47	-1.4
2,255,985	-		IAI47_10660	0.47	+0.4
2,255,985	-		IAI47_10660	0.47	+0.5
2,255,985	-		IAI47_10660	0.47	-0.1
2,255,985	-		IAI47_10660	0.47	+0.4
2,256,226	+		IAI47_10660	0.56	-1.3
2,256,226	+		IAI47_10660	0.56	+0.2
2,256,393	-		IAI47_10660	0.63	-1.9
2,256,394	+		IAI47_10660	0.63	+2.1
2,256,394	+		IAI47_10660	0.63	-0.4
2,256,518	+		IAI47_10660	0.68	-1.6
2,256,518	+		IAI47_10660	0.68	+1.4
2,256,518	+		IAI47_10660	0.68	+0.1
2,256,518	+		IAI47_10660	0.68	-0.1
2,256,519	-		IAI47_10660	0.68	+0.9
2,256,519	-		IAI47_10660	0.68	-0.1
2,256,519	-		IAI47_10660	0.68	+1.4
2,256,577	-		IAI47_10660	0.70	+0.5
2,256,605	+		IAI47_10660	0.71	+1.2
2,256,605	+		IAI47_10660	0.71	+7.8
2,256,605	+		IAI47_10660	0.71	+0.8
2,256,605	+		IAI47_10660	0.71	+0.5
2,256,606	-		IAI47_10660	0.71	+0.4
2,256,606	-		IAI47_10660	0.71	-2.0
2,256,668	+		IAI47_10660	0.74	-1.3
2,256,669	-		IAI47_10660	0.74	+0.0
2,256,669	-		IAI47_10660	0.74	-0.9
2,256,669	-		IAI47_10660	0.74	+0.3
2,256,669	-		IAI47_10660	0.74	+0.4
2,256,690	-		IAI47_10660	0.75	-0.9
2,256,690	-		IAI47_10660	0.75	+0.1
2,256,760	+		IAI47_10660	0.77	+0.3
2,256,761	-		IAI47_10660	0.77	-0.6
2,256,809	-		IAI47_10660	0.79	-0.8
2,256,830	-		IAI47_10660	0.80	+1.1
2,256,833	+		IAI47_10660	0.80	+1.5
2,256,833	+		IAI47_10660	0.80	-0.9
2,256,834	-		IAI47_10660	0.80	-1.6
2,256,834	-		IAI47_10660	0.80	+1.0
2,256,919	+		IAI47_10660	0.84	+3.4
2,257,076	-		IAI47_10660	0.90	+0.9
2,257,076	-		IAI47_10660	0.90	+1.1
2,257,122	+				+0.1
2,257,122	+				-0.4
2,257,122	+				-1.4
2,257,122	+				+0.6
2,257,122	+				-0.5
2,257,123	+				+0.4
2,257,123	-				-0.8
2,257,123	-				+0.9
2,257,123	-				-0.1
2,257,123	-				+0.4
2,257,123	-				-0.5
2,257,123	-				-0.2
2,257,123	-				+0.9
2,257,123	-				+0.8
2,257,196	-				+0.1
2,257,231	+				+0.7
2,257,231	+				-0.2
2,257,232	-				+0.5
2,257,232	-				+1.1
2,257,232	-				-1.4
2,257,235	+				+0.5
2,257,235	+				+0.0
2,257,236	-				+0.3
2,257,236	-				+1.1
2,257,236	-				+1.0
2,257,256	-				-0.1
2,257,256	-				-1.8
2,257,289	-				-0.0
2,257,289	-				+0.0
2,257,289	-				+0.5
2,257,289	-				+1.5
2,257,344	+				-1.8
2,257,344	+				+0.5
2,257,345	-				+1.1
2,257,345	-				-0.4
2,257,345	-				+0.2
2,257,352	+				+0.7
2,257,353	-				+1.1
2,257,353	-				+1.1
2,257,355	-				-0.3
2,257,355	-				+0.0
2,257,387	+				-0.6
2,257,387	+				+0.2
2,257,387	+				-0.3
2,257,387	+				-0.2
2,257,388	-				-0.9
2,257,388	-				+1.1
2,257,388	-				+1.0
2,257,417	-				+2.1
2,257,417	-				-0.9
2,257,436	+				-1.1
2,257,436	+				+0.6
2,257,436	+				+0.4
2,257,437	-				-0.2
2,257,516	+				-1.0
2,257,517	-				-0.2
2,257,564	+				-1.6
2,257,564	+				-0.9
2,257,565	-				+0.8
2,257,565	-				+0.2
2,257,565	-				+0.2
2,257,565	-				-0.9
2,257,565	-				+0.7
2,257,566	+				-0.5
2,257,567	-				+0.9
2,257,567	-				+2.6
2,257,567	-				-0.6
2,257,567	-				-0.1
2,257,567	-				-1.6
2,257,567	-				-0.5
2,257,567	-				+0.9
2,257,577	+				+2.2
2,257,577	+				+1.8
2,257,577	+				-0.5
2,257,578	-				+0.8
2,257,578	-				-1.0
2,257,578	-				-0.7
2,257,588	+				-0.1
2,257,618	+		IAI47_10665	0.11	-1.0
2,257,618	+		IAI47_10665	0.11	+1.5
2,257,619	-		IAI47_10665	0.11	+0.6
2,257,633	+		IAI47_10665	0.12	-0.1
2,257,643	-		IAI47_10665	0.12	+0.0
2,257,643	-		IAI47_10665	0.12	-0.4
2,257,643	-		IAI47_10665	0.12	-0.7
2,257,643	-		IAI47_10665	0.12	+2.1
2,257,683	-		IAI47_10665	0.14	-0.1
2,257,748	-		IAI47_10665	0.17	+0.9
2,257,756	+		IAI47_10665	0.18	+0.2
2,257,757	-		IAI47_10665	0.18	+0.0
2,257,757	-		IAI47_10665	0.18	+1.0
2,257,806	+		IAI47_10665	0.20	-0.1
2,257,806	+		IAI47_10665	0.20	+0.1
2,257,806	+		IAI47_10665	0.20	+0.2
2,257,807	-		IAI47_10665	0.20	+0.9
2,257,807	-		IAI47_10665	0.20	-1.2
2,257,833	+		IAI47_10665	0.21	-0.4
2,257,894	+		IAI47_10665	0.24	-0.2
2,257,894	+				+0.6
2,257,894	+		IAI47_10665	0.24	-0.2
2,257,894	+		IAI47_10665	0.24	+0.5
2,257,895	-		IAI47_10665	0.24	+0.9
2,257,895	-		IAI47_10665	0.24	-0.5
2,257,895	-		IAI47_10665	0.24	+0.3
2,257,895	-		IAI47_10665	0.24	+0.3
2,257,977	+		IAI47_10665	0.28	+0.8
2,257,993	+		IAI47_10665	0.29	+0.1
2,257,993	+		IAI47_10665	0.29	-0.2
2,257,993	+		IAI47_10665	0.29	+0.5
2,257,993	+		IAI47_10665	0.29	-1.4
2,257,993	+		IAI47_10665	0.29	+0.6
2,257,993	+		IAI47_10665	0.29	+0.4
2,257,994	-		IAI47_10665	0.29	+1.8
2,257,994	-		IAI47_10665	0.29	-1.5
2,257,994	-		IAI47_10665	0.29	+0.1
2,257,998	+		IAI47_10665	0.29	-0.2
2,257,998	+		IAI47_10665	0.29	+2.2
2,257,998	+		IAI47_10665	0.29	-1.9
2,257,998	+		IAI47_10665	0.29	+0.8
2,257,998	+		IAI47_10665	0.29	-1.4
2,257,999	-		IAI47_10665	0.29	+0.7
2,258,013	+		IAI47_10665	0.30	-1.2
2,258,013	+		IAI47_10665	0.30	+0.8
2,258,014	-		IAI47_10665	0.30	+1.2
2,258,070	+		IAI47_10665	0.33	+0.4
2,258,095	-		IAI47_10665	0.34	-0.4
2,258,131	+		IAI47_10665	0.36	+0.7
2,258,131	+		IAI47_10665	0.36	-0.1
2,258,218	+		IAI47_10665	0.40	+0.1
2,258,219	-		IAI47_10665	0.40	-0.5
2,258,219	-		IAI47_10665	0.40	+1.3
2,258,219	-		IAI47_10665	0.40	-0.8
2,258,277	+		IAI47_10665	0.43	+0.4
2,258,287	+		IAI47_10665	0.43	+1.4
2,258,287	+		IAI47_10665	0.43	-0.1
2,258,288	-		IAI47_10665	0.43	+0.5
2,258,288	-		IAI47_10665	0.43	-0.5
2,258,288	-		IAI47_10665	0.43	-0.1
2,258,290	+		IAI47_10665	0.43	+0.5
2,258,295	+		IAI47_10665	0.44	+0.3
2,258,295	+		IAI47_10665	0.44	+0.7
2,258,296	-		IAI47_10665	0.44	+3.5
2,258,296	-		IAI47_10665	0.44	+2.3
2,258,317	+		IAI47_10665	0.45	-1.6
2,258,318	-		IAI47_10665	0.45	+0.8
2,258,318	-		IAI47_10665	0.45	+1.1
2,258,318	-		IAI47_10665	0.45	+0.6
2,258,320	+		IAI47_10665	0.45	+0.1
2,258,321	-		IAI47_10665	0.45	-0.1
2,258,321	-		IAI47_10665	0.45	+2.6
2,258,321	-		IAI47_10665	0.45	+1.2
2,258,321	-		IAI47_10665	0.45	+0.7
2,258,321	-		IAI47_10665	0.45	+0.9
2,258,321	-		IAI47_10665	0.45	-0.3
2,258,321	-		IAI47_10665	0.45	+1.3
2,258,321	-		IAI47_10665	0.45	-0.2
2,258,321	-		IAI47_10665	0.45	+0.8