Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2861 and DvMF_2862 are separated by 182 nucleotides DvMF_2862 and DvMF_2863 are separated by 235 nucleotides DvMF_2863 and DvMF_2864 are separated by 310 nucleotides
DvMF_2861: DvMF_2861 - import inner membrane translocase subunit Tim44 (RefSeq), at 3,612,557 to 3,613,483
_2861
DvMF_2862: DvMF_2862 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (RefSeq), at 3,613,666 to 3,614,157
_2862
DvMF_2863: DvMF_2863 - AsmA family protein (RefSeq), at 3,614,393 to 3,616,528
_2863
DvMF_2864: DvMF_2864 - cobyric acid synthase (RefSeq), at 3,616,839 to 3,618,494
_2864
Position (kb)
3614
3615
3616
3617 Strain fitness (log2 ratio)
-1
0
1
2 at 3613.759 kb on - strand, within DvMF_2862 at 3614.016 kb on - strand, within DvMF_2862 at 3614.138 kb on + strand at 3614.218 kb on + strand at 3614.493 kb on + strand at 3614.494 kb on + strand at 3614.494 kb on + strand at 3614.725 kb on + strand, within DvMF_2863 at 3614.836 kb on + strand, within DvMF_2863 at 3615.205 kb on + strand, within DvMF_2863 at 3615.218 kb on - strand, within DvMF_2863 at 3615.528 kb on + strand, within DvMF_2863 at 3616.141 kb on + strand, within DvMF_2863 at 3616.342 kb on + strand at 3616.435 kb on + strand at 3616.518 kb on - strand at 3616.581 kb on + strand at 3616.767 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 3,613,759 - DvMF_2862 0.19 -0.3 3,614,016 - DvMF_2862 0.71 -0.3 3,614,138 + -0.2 3,614,218 + +0.0 3,614,493 + -0.6 3,614,494 + +0.4 3,614,494 + -0.4 3,614,725 + DvMF_2863 0.16 +1.8 3,614,836 + DvMF_2863 0.21 -0.2 3,615,205 + DvMF_2863 0.38 +0.1 3,615,218 - DvMF_2863 0.39 -0.9 3,615,528 + DvMF_2863 0.53 -0.7 3,616,141 + DvMF_2863 0.82 +0.4 3,616,342 + -0.2 3,616,435 + +0.3 3,616,518 - +0.3 3,616,581 + -0.2 3,616,767 + -0.3
Or see this region's nucleotide sequence