Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1083 and DvMF_1084 are separated by 238 nucleotides DvMF_1084 and DvMF_1085 are separated by 67 nucleotides DvMF_1085 and DvMF_1086 are separated by 9 nucleotides
DvMF_1083: DvMF_1083 - TPR repeat-containing protein (RefSeq), at 1,322,238 to 1,322,894
_1083
DvMF_1084: DvMF_1084 - OmpA/MotB domain protein (RefSeq), at 1,323,133 to 1,323,858
_1084
DvMF_1085: DvMF_1085 - flagellar motor protein MotA (RefSeq), at 1,323,926 to 1,324,771
_1085
DvMF_1086: DvMF_1086 - hypothetical protein (RefSeq), at 1,324,781 to 1,325,494
_1086
Position (kb)
1323
1324 Strain fitness (log2 ratio)
-1
0
1
2 at 1323.225 kb on + strand, within DvMF_1084 at 1323.226 kb on - strand, within DvMF_1084 at 1323.249 kb on + strand, within DvMF_1084 at 1323.257 kb on - strand, within DvMF_1084 at 1323.299 kb on - strand, within DvMF_1084 at 1323.396 kb on + strand, within DvMF_1084 at 1323.404 kb on - strand, within DvMF_1084 at 1323.490 kb on - strand, within DvMF_1084 at 1324.062 kb on + strand, within DvMF_1085 at 1324.072 kb on - strand, within DvMF_1085 at 1324.138 kb on - strand, within DvMF_1085 at 1324.167 kb on + strand, within DvMF_1085 at 1324.232 kb on - strand, within DvMF_1085 at 1324.608 kb on - strand, within DvMF_1085 at 1324.608 kb on - strand, within DvMF_1085 at 1324.857 kb on - strand, within DvMF_1086
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 1,323,225 + DvMF_1084 0.13 +1.5 1,323,226 - DvMF_1084 0.13 +1.7 1,323,249 + DvMF_1084 0.16 +1.5 1,323,257 - DvMF_1084 0.17 +1.5 1,323,299 - DvMF_1084 0.23 +1.5 1,323,396 + DvMF_1084 0.36 +1.2 1,323,404 - DvMF_1084 0.37 +1.6 1,323,490 - DvMF_1084 0.49 +1.5 1,324,062 + DvMF_1085 0.16 +1.7 1,324,072 - DvMF_1085 0.17 +1.4 1,324,138 - DvMF_1085 0.25 +1.5 1,324,167 + DvMF_1085 0.28 +1.6 1,324,232 - DvMF_1085 0.36 +1.5 1,324,608 - DvMF_1085 0.81 +2.0 1,324,608 - DvMF_1085 0.81 +1.4 1,324,857 - DvMF_1086 0.11 +0.3
Or see this region's nucleotide sequence