Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0030 and DvMF_0031 are separated by 298 nucleotides DvMF_0031 and DvMF_0032 are separated by 276 nucleotides DvMF_0032 and DvMF_0033 are separated by 120 nucleotides
DvMF_0030: DvMF_0030 - hypothetical protein (RefSeq), at 38,598 to 38,939
_0030
DvMF_0031: DvMF_0031 - hypothetical protein (RefSeq), at 39,238 to 39,513
_0031
DvMF_0032: DvMF_0032 - diguanylate cyclase (RefSeq), at 39,790 to 41,526
_0032
DvMF_0033: DvMF_0033 - no description, at 41,647 to 43,079
_0033
Position (kb) 39
40
41
42 Strain fitness (log2 ratio) -1
0
1 at 38.913 kb on - strand at 38.931 kb on + strand at 38.996 kb on - strand at 39.227 kb on - strand at 39.295 kb on + strand, within DvMF_0031 at 39.303 kb on - strand, within DvMF_0031 at 39.765 kb on + strand at 39.774 kb on + strand at 39.798 kb on + strand at 40.082 kb on - strand, within DvMF_0032 at 40.170 kb on - strand, within DvMF_0032 at 40.287 kb on + strand, within DvMF_0032 at 40.327 kb on - strand, within DvMF_0032 at 40.591 kb on + strand, within DvMF_0032 at 40.670 kb on - strand, within DvMF_0032 at 40.869 kb on - strand, within DvMF_0032 at 41.020 kb on - strand, within DvMF_0032 at 41.023 kb on + strand, within DvMF_0032 at 41.052 kb on - strand, within DvMF_0032 at 41.074 kb on + strand, within DvMF_0032 at 41.858 kb on - strand, within DvMF_0033 at 41.879 kb on + strand, within DvMF_0033 at 41.879 kb on + strand, within DvMF_0033 at 41.879 kb on + strand, within DvMF_0033 at 41.879 kb on + strand, within DvMF_0033 at 41.879 kb on + strand, within DvMF_0033 at 41.879 kb on + strand, within DvMF_0033 at 41.887 kb on - strand, within DvMF_0033 at 41.887 kb on - strand, within DvMF_0033 at 41.887 kb on - strand, within DvMF_0033 at 41.912 kb on - strand, within DvMF_0033 at 41.943 kb on - strand, within DvMF_0033 at 41.950 kb on - strand, within DvMF_0033 at 42.315 kb on - strand, within DvMF_0033 at 42.387 kb on + strand, within DvMF_0033 at 42.388 kb on + strand, within DvMF_0033 at 42.396 kb on - strand, within DvMF_0033 at 42.396 kb on - strand, within DvMF_0033 at 42.438 kb on - strand, within DvMF_0033
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 38,913 - -0.3 38,931 + -0.0 38,996 - -0.2 39,227 - -0.0 39,295 + DvMF_0031 0.21 -0.2 39,303 - DvMF_0031 0.24 -0.1 39,765 + -1.4 39,774 + -1.5 39,798 + +0.6 40,082 - DvMF_0032 0.17 +0.8 40,170 - DvMF_0032 0.22 +0.5 40,287 + DvMF_0032 0.29 +0.4 40,327 - DvMF_0032 0.31 +0.8 40,591 + DvMF_0032 0.46 +1.2 40,670 - DvMF_0032 0.51 +0.5 40,869 - DvMF_0032 0.62 +0.7 41,020 - DvMF_0032 0.71 -0.0 41,023 + DvMF_0032 0.71 +0.9 41,052 - DvMF_0032 0.73 +0.6 41,074 + DvMF_0032 0.74 +0.8 41,858 - DvMF_0033 0.15 -0.1 41,879 + DvMF_0033 0.16 +1.5 41,879 + DvMF_0033 0.16 -0.2 41,879 + DvMF_0033 0.16 -0.5 41,879 + DvMF_0033 0.16 -0.0 41,879 + DvMF_0033 0.16 -0.4 41,879 + DvMF_0033 0.16 -0.3 41,887 - DvMF_0033 0.17 -0.5 41,887 - DvMF_0033 0.17 -0.3 41,887 - DvMF_0033 0.17 -0.1 41,912 - DvMF_0033 0.18 -0.4 41,943 - DvMF_0033 0.21 +0.2 41,950 - DvMF_0033 0.21 -0.1 42,315 - DvMF_0033 0.47 +0.0 42,387 + DvMF_0033 0.52 -0.1 42,388 + DvMF_0033 0.52 -0.3 42,396 - DvMF_0033 0.52 +0.2 42,396 - DvMF_0033 0.52 +0.8 42,438 - DvMF_0033 0.55 -0.0
Or see this region's nucleotide sequence