Strain Fitness in Pantoea sp. MT58 around IAI47_16535

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50
3,500,251	+		IAI47_16525	0.71	+0.9
3,500,263	+		IAI47_16525	0.73	-1.3
3,500,264	-		IAI47_16525	0.73	-0.1
3,500,274	+		IAI47_16525	0.74	+0.4
3,500,275	-		IAI47_16525	0.74	-1.2
3,500,275	-		IAI47_16525	0.74	-0.5
3,500,275	-		IAI47_16525	0.74	-0.1
3,500,286	+		IAI47_16525	0.76	-1.6
3,500,286	+		IAI47_16525	0.76	+0.6
3,500,287	-		IAI47_16525	0.76	-2.2
3,500,287	-		IAI47_16525	0.76	+0.5
3,500,302	+		IAI47_16525	0.78	+0.7
3,500,366	-		IAI47_16525	0.87	-0.3
3,500,391	+				+0.4
3,500,392	-				+0.1
3,500,392	-				-0.7
3,500,392	-				-1.7
3,500,396	+				-1.3
3,500,396	+				+1.0
3,500,396	+				-0.7
3,500,396	+				-0.9
3,500,396	+				-0.3
3,500,397	-				-0.2
3,500,397	-				-0.5
3,500,397	-				-1.1
3,500,397	-				-0.2
3,500,397	-				-0.2
3,500,397	-				+0.2
3,500,397	-				-0.1
3,500,397	-				+0.4
3,500,397	-				+0.8
3,500,411	+				-0.3
3,500,411	+				-2.0
3,500,411	+				-1.5
3,500,412	-				+0.5
3,500,434	+				-0.6
3,500,435	-				-0.2
3,500,455	+				-2.5
3,500,455	+				+0.8
3,500,455	+				-0.0
3,500,455	+				+0.4
3,500,455	+				-0.0
3,500,455	+				+0.2
3,500,456	-				-0.7
3,500,456	-				+0.7
3,500,456	-				-2.2
3,500,456	-				-0.7
3,500,456	-				+1.5
3,500,456	-				+0.3
3,500,459	+				-0.5
3,500,459	+				+0.4
3,500,459	+				-1.5
3,500,459	+				+1.1
3,500,459	+				+0.6
3,500,459	+				-0.6
3,500,459	+				+0.1
3,500,459	+				-1.3
3,500,459	+				+0.2
3,500,459	+				-0.0
3,500,459	+				-2.6
3,500,459	+				-0.1
3,500,460	-				-0.5
3,500,460	-				+0.4
3,500,460	-				-0.1
3,500,460	-				+1.8
3,500,460	-				+0.4
3,500,460	-				-0.6
3,500,460	-				-0.4
3,500,460	-				-0.1
3,500,460	-				+1.4
3,500,460	-				+0.2
3,500,460	-				-0.4
3,500,460	-				+0.7
3,500,460	-				+0.8
3,500,460	-				+0.9
3,500,460	-				+1.1
3,500,460	-				-0.7
3,500,460	-				+0.0
3,500,469	+				-0.5
3,500,469	+				-0.4
3,500,469	+				-0.8
3,500,469	+				+0.4
3,500,469	+				-0.4
3,500,469	+				+0.6
3,500,469	+				+0.5
3,500,469	+				+0.3
3,500,469	+				-1.0
3,500,469	+				-1.7
3,500,469	+				+0.7
3,500,469	+				+0.2
3,500,469	+				-0.9
3,500,470	-				+0.1
3,500,470	-				+0.1
3,500,470	-				-0.1
3,500,470	-				-0.3
3,500,470	-				-1.3
3,500,470	-				+0.2
3,500,470	-				+0.1
3,500,470	-				+0.3
3,500,473	+				-0.2
3,500,473	+				-1.3
3,500,473	+				-0.0
3,500,474	-				+0.8
3,500,474	-				-0.1
3,500,474	-				-0.2
3,500,474	-				+0.8
3,500,474	-				-0.1
3,500,474	-				+0.4
3,500,474	-				+0.6
3,500,474	-				+0.8
3,500,474	-				+0.5
3,500,491	+				+0.8
3,500,492	-				-0.4
3,500,492	-				+0.2
3,500,493	+				-0.7
3,500,493	+				-0.9
3,500,493	+				-0.8
3,500,493	+				-0.9
3,500,493	+				-0.8
3,500,493	+				+0.9
3,500,493	+				-0.3
3,500,494	-				-0.9
3,500,494	-				-0.3
3,500,494	-				+0.2
3,500,494	-				+0.9
3,500,494	-				+0.9
3,500,494	-				+1.0
3,500,535	-				+0.5
3,500,543	+				+0.6
3,500,543	+				-0.9
3,500,543	+				-2.1
3,500,544	-				-0.5
3,500,544	-				-2.4
3,500,553	+				+0.3
3,500,553	+				-0.2
3,500,553	+				-0.9
3,500,553	+				-0.8
3,500,554	-				-1.4
3,500,554	-				-0.0
3,500,554	-				-1.3
3,500,556	+				-2.0
3,500,557	-				+1.0
3,500,611	+				+0.3
3,500,612	-				-0.2
3,500,612	-				-0.6
3,500,643	+				-0.7
3,500,644	-				+1.2
3,500,661	-		IAI47_16530	0.14	+0.2
3,500,661	-		IAI47_16530	0.14	+0.5
3,500,677	+		IAI47_16530	0.19	-1.1
3,500,677	+		IAI47_16530	0.19	-0.0
3,500,678	-		IAI47_16530	0.19	+0.5
3,500,686	+		IAI47_16530	0.21	-0.6
3,500,687	-		IAI47_16530	0.22	+0.6
3,500,687	-		IAI47_16530	0.22	-0.6
3,500,687	-		IAI47_16530	0.22	-0.1
3,500,687	-		IAI47_16530	0.22	-1.3
3,500,687	-		IAI47_16530	0.22	-0.5
3,500,687	-		IAI47_16530	0.22	+0.2
3,500,689	+		IAI47_16530	0.22	-1.8
3,500,689	+		IAI47_16530	0.22	-0.3
3,500,689	+		IAI47_16530	0.22	+0.4
3,500,690	-		IAI47_16530	0.22	-0.2
3,500,690	-		IAI47_16530	0.22	+0.6
3,500,749	+		IAI47_16530	0.39	+0.7
3,500,749	+		IAI47_16530	0.39	+0.6
3,500,749	+		IAI47_16530	0.39	+0.5
3,500,749	+		IAI47_16530	0.39	-1.5
3,500,750	-		IAI47_16530	0.39	-0.0
3,500,750	-		IAI47_16530	0.39	-0.3
3,500,750	-		IAI47_16530	0.39	+2.0
3,500,750	-		IAI47_16530	0.39	-0.8
3,500,792	+		IAI47_16530	0.51	-1.7
3,500,793	-		IAI47_16530	0.51	-0.8
3,500,820	-		IAI47_16530	0.59	+1.5
3,500,820	-		IAI47_16530	0.59	-0.4
3,500,848	-		IAI47_16530	0.67	+1.5
3,500,848	-		IAI47_16530	0.67	-0.4
3,500,848	-		IAI47_16530	0.67	-1.2
3,500,882	+		IAI47_16530	0.76	-0.4
3,500,882	+		IAI47_16530	0.76	-2.5
3,500,882	+		IAI47_16530	0.76	+0.8
3,500,883	-		IAI47_16530	0.76	-0.1
3,500,883	-		IAI47_16530	0.76	-0.1
3,500,887	-		IAI47_16530	0.78	+1.1
3,500,887	-		IAI47_16530	0.78	-1.1
3,500,887	-		IAI47_16530	0.78	+1.2
3,500,937	+				+0.2
3,500,938	-				+1.1
3,500,938	-				-0.6
3,500,988	-				+1.5
3,500,995	+				-0.2
3,500,995	+				-1.6
3,500,995	+				-1.8
3,500,996	-				-0.1
3,501,021	-				+1.2
3,501,029	+				-1.5
3,501,030	-				-1.7
3,501,033	-				-0.0
3,501,051	-				+0.5
3,501,078	+				-1.7
3,501,078	+				+0.7
3,501,078	+				+0.0
3,501,079	-				-0.2
3,501,079	-				+1.0
3,501,102	+				-0.2
3,501,102	+				-0.0
3,501,103	-				+0.8
3,501,103	-				+0.7
3,501,103	-				+0.7
3,501,120	+				-1.7
3,501,120	+				-0.2
3,501,121	-				-0.4
3,501,121	-				+0.8
3,501,121	-				+0.3
3,501,124	-				-0.9
3,501,128	+				-3.4
3,501,129	-				+0.2
3,501,148	+				-0.6
3,501,162	+				+0.9
3,501,162	+				-1.1
3,501,163	-				-0.4
3,501,163	-				+0.1
3,501,163	-				-0.7
3,501,165	-				+0.4
3,501,165	-				+0.2
3,501,205	+				-0.4
3,501,205	+				+1.6
3,501,205	+				+2.0
3,501,206	-				+1.4
3,501,206	-				+0.2
3,501,225	-				-1.0
3,501,240	-				+0.8
3,501,271	+		IAI47_16535	0.10	-0.6
3,501,271	+		IAI47_16535	0.10	+0.2
3,501,272	-		IAI47_16535	0.10	+1.3
3,501,272	-		IAI47_16535	0.10	+0.5
3,501,304	+		IAI47_16535	0.21	-0.6
3,501,305	-		IAI47_16535	0.22	+1.5
3,501,346	+		IAI47_16535	0.35	+0.9
3,501,346	+		IAI47_16535	0.35	-0.6
3,501,347	-		IAI47_16535	0.36	-0.7
3,501,353	-		IAI47_16535	0.38	+0.0
3,501,363	+		IAI47_16535	0.41	+0.4
3,501,363	+		IAI47_16535	0.41	-1.4
3,501,364	-		IAI47_16535	0.41	-0.9
3,501,364	-		IAI47_16535	0.41	+1.0
3,501,385	-		IAI47_16535	0.48	+0.4
3,501,410	-		IAI47_16535	0.57	-0.5
3,501,410	-		IAI47_16535	0.57	+0.7
3,501,420	-		IAI47_16535	0.60	+0.6
3,501,420	-		IAI47_16535	0.60	+0.1
3,501,424	+		IAI47_16535	0.62	-1.0
3,501,424	+		IAI47_16535	0.62	-0.7
3,501,430	+		IAI47_16535	0.64	-0.7
3,501,431	-		IAI47_16535	0.64	-0.6
3,501,432	+		IAI47_16535	0.64	-1.1
3,501,432	+		IAI47_16535	0.64	-0.6
3,501,433	-		IAI47_16535	0.65	-0.3
3,501,433	-		IAI47_16535	0.65	-1.2
3,501,433	-		IAI47_16535	0.65	-1.0
3,501,480	+		IAI47_16535	0.80	-0.8
3,501,480	+		IAI47_16535	0.80	-0.1
3,501,480	+		IAI47_16535	0.80	-0.5
3,501,480	+		IAI47_16535	0.80	+0.5
3,501,481	-		IAI47_16535	0.81	-2.1
3,501,481	-		IAI47_16535	0.81	-1.8
3,501,482	+		IAI47_16535	0.81	-0.1
3,501,482	+		IAI47_16535	0.81	-1.1
3,501,482	+		IAI47_16535	0.81	-0.5
3,501,483	-		IAI47_16535	0.81	-0.2
3,501,483	-		IAI47_16535	0.81	-0.3
3,501,483	-		IAI47_16535	0.81	+1.3
3,501,492	+		IAI47_16535	0.85	+0.1
3,501,493	-		IAI47_16535	0.85	-0.5
3,501,496	+		IAI47_16535	0.86	-1.9
3,501,569	+		IAI47_16540	0.11	+0.7
3,501,612	+		IAI47_16540	0.24	-0.9
3,501,612	+		IAI47_16540	0.24	-0.7
3,501,612	+		IAI47_16540	0.24	-0.3
3,501,612	+		IAI47_16540	0.24	-1.0
3,501,612	+		IAI47_16540	0.24	+0.6
3,501,612	+		IAI47_16540	0.24	-0.3
3,501,613	-		IAI47_16540	0.24	-0.7
3,501,665	+		IAI47_16540	0.40	+0.5
3,501,665	+		IAI47_16540	0.40	-0.7
3,501,665	+		IAI47_16540	0.40	-1.0
3,501,665	+		IAI47_16540	0.40	-1.5
3,501,666	-		IAI47_16540	0.40	-0.0
3,501,666	-		IAI47_16540	0.40	+0.7
3,501,666	-		IAI47_16540	0.40	-0.8
3,501,666	-		IAI47_16540	0.40	-1.9
3,501,666	-		IAI47_16540	0.40	-0.1
3,501,666	-		IAI47_16540	0.40	+0.7
3,501,678	+		IAI47_16540	0.44	-0.8
3,501,679	-		IAI47_16540	0.44	+0.8
3,501,679	-		IAI47_16540	0.44	+1.6
3,501,684	+		IAI47_16540	0.45	-0.6
3,501,685	-		IAI47_16540	0.46	+1.1
3,501,685	-		IAI47_16540	0.46	-0.1
3,501,685	-		IAI47_16540	0.46	+0.6
3,501,685	-		IAI47_16540	0.46	-0.5
3,501,690	+		IAI47_16540	0.47	-1.7
3,501,690	+		IAI47_16540	0.47	-0.4
3,501,691	-		IAI47_16540	0.48	+0.9
3,501,691	-		IAI47_16540	0.48	-0.5
3,501,691	-		IAI47_16540	0.48	-0.4
3,501,693	+		IAI47_16540	0.48	+0.7
3,501,693	+		IAI47_16540	0.48	-0.4
3,501,693	+		IAI47_16540	0.48	-0.7
3,501,693	+		IAI47_16540	0.48	+1.3
3,501,693	+		IAI47_16540	0.48	+0.8
3,501,693	+		IAI47_16540	0.48	+0.5
3,501,693	+		IAI47_16540	0.48	+1.1
3,501,693	+		IAI47_16540	0.48	+1.0
3,501,694	-		IAI47_16540	0.48	-0.0
3,501,694	-		IAI47_16540	0.48	+0.3
3,501,694	-		IAI47_16540	0.48	-0.8
3,501,694	-		IAI47_16540	0.48	+0.2
3,501,694	-		IAI47_16540	0.48	-0.5
3,501,698	+		IAI47_16540	0.50	-1.1
3,501,698	+		IAI47_16540	0.50	-1.2
3,501,698	+		IAI47_16540	0.50	+0.0
3,501,699	-		IAI47_16540	0.50	-2.0
3,501,699	-		IAI47_16540	0.50	-0.7
3,501,699	-		IAI47_16540	0.50	+4.2
3,501,699	-		IAI47_16540	0.50	+1.0
3,501,699	-		IAI47_16540	0.50	+0.0
3,501,763	+		IAI47_16540	0.69	+0.2
3,501,795	+		IAI47_16540	0.79	-1.3
3,501,795	+		IAI47_16540	0.79	+1.4
3,501,845	+				-0.7
3,501,846	-				-1.3
3,501,846	-				+0.5
3,501,846	-				-0.4
3,501,867	+				+0.0
3,501,868	-				-0.7
3,501,868	-				+0.9
3,501,871	-				-0.2
3,501,871	-				-0.2
3,501,880	-				+1.7
3,501,883	+				+0.5
3,501,886	+				+0.3
3,501,887	-				+0.0
3,501,934	+				+0.6
3,501,944	+				+0.9
3,501,944	+				-0.0
3,501,945	-				+0.4
3,501,945	-				+0.8
3,501,949	-				-0.1
3,501,949	-				-0.6
3,501,949	-				+0.5
3,501,995	-				-2.0
3,502,026	-				-3.2
3,502,051	+				-1.9
3,502,256	+		IAI47_16545	0.12	+0.3
3,502,257	-		IAI47_16545	0.12	-0.9
3,502,276	-		IAI47_16545	0.14	-0.5
3,502,312	+		IAI47_16545	0.16	+0.2
3,502,330	-		IAI47_16545	0.18	-1.5
3,502,389	+		IAI47_16545	0.22	-0.2
3,502,390	-		IAI47_16545	0.22	-0.9
3,502,390	-		IAI47_16545	0.22	-1.0
3,502,447	+		IAI47_16545	0.26	-0.6
3,502,469	+		IAI47_16545	0.28	-2.1
3,502,469	+		IAI47_16545	0.28	+0.1
3,502,470	-		IAI47_16545	0.28	-0.6
3,502,473	+		IAI47_16545	0.28	-0.8
3,502,491	-		IAI47_16545	0.30	-0.0