Strain Fitness in Pantoea sp. MT58 around IAI47_09820

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50
2,076,353	-		IAI47_09815	0.31	+0.5
2,076,465	+		IAI47_09815	0.39	-0.7
2,076,465	+		IAI47_09815	0.39	+0.5
2,076,465	+		IAI47_09815	0.39	+0.9
2,076,466	-		IAI47_09815	0.39	+1.2
2,076,466	-		IAI47_09815	0.39	-0.4
2,076,466	-		IAI47_09815	0.39	+0.3
2,076,525	-		IAI47_09815	0.43	+1.1
2,076,595	+		IAI47_09815	0.48	+0.2
2,076,595	+		IAI47_09815	0.48	+0.8
2,076,595	+		IAI47_09815	0.48	+0.9
2,076,596	-		IAI47_09815	0.48	+1.3
2,076,596	-		IAI47_09815	0.48	-1.0
2,076,596	-		IAI47_09815	0.48	+0.3
2,076,596	-		IAI47_09815	0.48	-0.6
2,076,640	+		IAI47_09815	0.51	+0.9
2,076,640	+		IAI47_09815	0.51	+1.1
2,076,641	-		IAI47_09815	0.51	-0.0
2,076,641	-		IAI47_09815	0.51	-0.3
2,076,668	+		IAI47_09815	0.53	+1.0
2,076,669	-		IAI47_09815	0.53	+0.7
2,076,669	-		IAI47_09815	0.53	-0.5
2,076,669	-		IAI47_09815	0.53	-2.0
2,076,799	+		IAI47_09815	0.62	+0.4
2,076,806	-		IAI47_09815	0.62	+1.0
2,076,806	-		IAI47_09815	0.62	+0.2
2,076,819	+		IAI47_09815	0.63	+0.1
2,077,033	+		IAI47_09815	0.78	-0.5
2,077,033	+		IAI47_09815	0.78	+1.8
2,077,034	-		IAI47_09815	0.78	-0.8
2,077,034	-		IAI47_09815	0.78	+1.0
2,077,034	-		IAI47_09815	0.78	-0.0
2,077,337	+				+0.2
2,077,337	+				+0.6
2,077,337	+				+0.4
2,077,338	-				-0.6
2,077,346	+				-0.2
2,077,347	-				-0.2
2,077,386	+				-0.0
2,077,386	+				+0.2
2,077,387	-				+1.5
2,077,387	-				+1.5
2,077,387	-				-0.1
2,077,387	-				+0.9
2,077,387	-				-0.0
2,077,399	+				-0.7
2,077,399	+				+1.1
2,077,399	+				-1.1
2,077,399	+				+0.2
2,077,411	+				+0.3
2,077,412	-				-0.4
2,077,478	+				-0.5
2,077,499	-				-0.0
2,077,499	-				+0.2
2,077,550	+				-0.0
2,077,550	+				+0.6
2,077,550	+				-0.9
2,077,569	+				-0.5
2,077,569	+				+0.4
2,077,570	-				-1.1
2,077,570	-				-1.4
2,077,594	+		IAI47_09820	0.11	+1.0
2,077,594	+		IAI47_09820	0.11	+0.4
2,077,594	+		IAI47_09820	0.11	+1.1
2,077,594	+		IAI47_09820	0.11	-0.5
2,077,595	-		IAI47_09820	0.11	-0.5
2,077,597	+		IAI47_09820	0.11	-0.5
2,077,598	-		IAI47_09820	0.11	+0.8
2,077,680	+		IAI47_09820	0.14	-0.8
2,077,680	+		IAI47_09820	0.14	+1.3
2,077,681	-		IAI47_09820	0.14	+0.2
2,077,681	-		IAI47_09820	0.14	+1.8
2,077,761	+		IAI47_09820	0.18	+0.8
2,077,761	+		IAI47_09820	0.18	-0.6
2,077,761	+		IAI47_09820	0.18	+0.2
2,077,761	+		IAI47_09820	0.18	+1.4
2,077,762	-		IAI47_09820	0.18	-0.2
2,077,819	+		IAI47_09820	0.20	+0.4
2,077,820	-		IAI47_09820	0.20	-0.3
2,077,902	-		IAI47_09820	0.24	-1.2
2,077,924	-		IAI47_09820	0.25	+1.9
2,077,924	-		IAI47_09820	0.25	-0.4
2,077,924	-		IAI47_09820	0.25	-0.5
2,078,048	+		IAI47_09820	0.30	-0.8
2,078,048	+		IAI47_09820	0.30	+1.5
2,078,048	+		IAI47_09820	0.30	+1.2
2,078,048	+		IAI47_09820	0.30	+0.4
2,078,049	-		IAI47_09820	0.30	-1.5
2,078,049	-		IAI47_09820	0.30	+0.5
2,078,049	-		IAI47_09820	0.30	+0.5
2,078,059	+		IAI47_09820	0.30	-1.0
2,078,059	+		IAI47_09820	0.30	+1.1
2,078,059	+		IAI47_09820	0.30	+2.8
2,078,059	+		IAI47_09820	0.30	-0.0
2,078,059	+		IAI47_09820	0.30	+1.1
2,078,059	+		IAI47_09820	0.30	-0.6
2,078,059	+		IAI47_09820	0.30	+0.4
2,078,059	+		IAI47_09820	0.30	+1.1
2,078,059	+		IAI47_09820	0.30	+1.3
2,078,059	+		IAI47_09820	0.30	+0.2
2,078,060	-		IAI47_09820	0.31	+0.3
2,078,060	-		IAI47_09820	0.31	+1.5
2,078,060	-		IAI47_09820	0.31	+1.3
2,078,060	-		IAI47_09820	0.31	-0.0
2,078,060	-		IAI47_09820	0.31	-0.4
2,078,063	+		IAI47_09820	0.31	+0.5
2,078,063	+		IAI47_09820	0.31	+0.0
2,078,063	+		IAI47_09820	0.31	-0.6
2,078,063	+		IAI47_09820	0.31	-0.0
2,078,063	+		IAI47_09820	0.31	+0.7
2,078,063	+		IAI47_09820	0.31	-1.1
2,078,063	+		IAI47_09820	0.31	-1.6
2,078,063	+		IAI47_09820	0.31	+0.2
2,078,064	-		IAI47_09820	0.31	-1.9
2,078,064	-		IAI47_09820	0.31	-1.5
2,078,064	-		IAI47_09820	0.31	-0.2
2,078,064	-		IAI47_09820	0.31	+1.0
2,078,064	-		IAI47_09820	0.31	+0.6
2,078,137	+		IAI47_09820	0.34	-0.5
2,078,138	-		IAI47_09820	0.34	-1.0
2,078,138	-		IAI47_09820	0.34	-1.9
2,078,138	-		IAI47_09820	0.34	-1.5
2,078,289	-		IAI47_09820	0.40	+2.8
2,078,321	+		IAI47_09820	0.42	+0.6
2,078,321	+		IAI47_09820	0.42	-1.4
2,078,322	-		IAI47_09820	0.42	-1.8
2,078,322	-		IAI47_09820	0.42	-1.0
2,078,322	-		IAI47_09820	0.42	-0.4
2,078,322	-		IAI47_09820	0.42	-0.5
2,078,358	+		IAI47_09820	0.43	-0.0
2,078,359	-		IAI47_09820	0.43	+1.2
2,078,362	-		IAI47_09820	0.43	-1.4
2,078,362	-		IAI47_09820	0.43	-1.0
2,078,362	-		IAI47_09820	0.43	-0.5
2,078,405	+		IAI47_09820	0.45	-0.3
2,078,451	-		IAI47_09820	0.47	-2.2
2,078,451	-		IAI47_09820	0.47	-0.5
2,078,525	+		IAI47_09820	0.50	-2.2
2,078,525	+		IAI47_09820	0.50	+0.9
2,078,525	+		IAI47_09820	0.50	-1.3
2,078,525	+		IAI47_09820	0.50	+0.4
2,078,525	+		IAI47_09820	0.50	+0.2
2,078,525	+		IAI47_09820	0.50	+1.6
2,078,526	-		IAI47_09820	0.50	+0.7
2,078,526	-		IAI47_09820	0.50	-0.3
2,078,526	-		IAI47_09820	0.50	-0.4
2,078,526	-		IAI47_09820	0.50	-1.3
2,078,529	+		IAI47_09820	0.50	+3.4
2,078,529	+		IAI47_09820	0.50	-2.4
2,078,529	+		IAI47_09820	0.50	+1.0
2,078,529	+		IAI47_09820	0.50	-0.1
2,078,529	+		IAI47_09820	0.50	-0.9
2,078,529	+		IAI47_09820	0.50	-1.1
2,078,529	+		IAI47_09820	0.50	-2.3
2,078,529	+		IAI47_09820	0.50	-1.1
2,078,530	-		IAI47_09820	0.50	-0.5
2,078,530	-		IAI47_09820	0.50	-0.7
2,078,530	-		IAI47_09820	0.50	-1.1
2,078,530	-		IAI47_09820	0.50	+1.6
2,078,533	-		IAI47_09820	0.50	-1.1
2,078,533	-		IAI47_09820	0.50	-2.0
2,078,563	-		IAI47_09820	0.52	-1.1
2,078,629	-		IAI47_09820	0.55	+0.8
2,078,726	+		IAI47_09820	0.59	-0.7
2,078,727	-		IAI47_09820	0.59	-0.2
2,078,769	+		IAI47_09820	0.60	-0.7
2,078,769	+		IAI47_09820	0.60	-1.4
2,078,769	+		IAI47_09820	0.60	-1.1
2,078,770	-		IAI47_09820	0.60	-0.7
2,078,858	-		IAI47_09820	0.64	-1.7
2,078,858	-		IAI47_09820	0.64	+1.0
2,078,858	-		IAI47_09820	0.64	-0.4
2,078,858	-		IAI47_09820	0.64	-0.0
2,078,866	+		IAI47_09820	0.65	-1.1
2,078,866	+		IAI47_09820	0.65	-0.1
2,078,867	-		IAI47_09820	0.65	-0.7
2,078,867	-		IAI47_09820	0.65	-1.4
2,078,867	-		IAI47_09820	0.65	-0.2
2,078,888	+		IAI47_09820	0.65	-0.0
2,078,907	-		IAI47_09820	0.66	-1.1
2,078,918	+		IAI47_09820	0.67	+1.8
2,078,918	+		IAI47_09820	0.67	-0.5
2,078,919	-		IAI47_09820	0.67	-0.3
2,079,067	+		IAI47_09820	0.73	-0.2
2,079,068	-		IAI47_09820	0.73	+0.5
2,079,068	-		IAI47_09820	0.73	+0.8
2,079,087	+		IAI47_09820	0.74	+0.7
2,079,088	-		IAI47_09820	0.74	+0.8
2,079,088	-		IAI47_09820	0.74	-1.1
2,079,088	-		IAI47_09820	0.74	+2.5
2,079,153	+		IAI47_09820	0.77	-1.1
2,079,153	+		IAI47_09820	0.77	+1.0
2,079,153	+		IAI47_09820	0.77	-1.0
2,079,154	-		IAI47_09820	0.77	+0.4
2,079,154	-		IAI47_09820	0.77	+0.1
2,079,174	+		IAI47_09820	0.78	-1.9
2,079,175	-		IAI47_09820	0.78	+1.5
2,079,207	+		IAI47_09820	0.79	+0.4
2,079,207	+		IAI47_09820	0.79	-1.1
2,079,207	+		IAI47_09820	0.79	+0.2
2,079,207	+		IAI47_09820	0.79	-0.7
2,079,207	+		IAI47_09820	0.79	-1.4
2,079,207	+		IAI47_09820	0.79	-0.5
2,079,208	-		IAI47_09820	0.79	+0.5
2,079,208	-		IAI47_09820	0.79	-0.4
2,079,208	-		IAI47_09820	0.79	+1.8
2,079,208	-		IAI47_09820	0.79	-0.4
2,079,208	-		IAI47_09820	0.79	+0.2
2,079,208	-		IAI47_09820	0.79	+0.2
2,079,208	-		IAI47_09820	0.79	-2.1
2,079,208	-		IAI47_09820	0.79	-1.0
2,079,208	-		IAI47_09820	0.79	+3.8
2,079,208	-		IAI47_09820	0.79	+0.4
2,079,210	+		IAI47_09820	0.79	+1.1
2,079,210	+		IAI47_09820	0.79	-0.4
2,079,210	+		IAI47_09820	0.79	+1.0
2,079,213	+		IAI47_09820	0.79	+1.9
2,079,213	+		IAI47_09820	0.79	-1.4
2,079,213	+		IAI47_09820	0.79	-0.3
2,079,213	+		IAI47_09820	0.79	+1.0
2,079,213	+		IAI47_09820	0.79	+0.8
2,079,213	+		IAI47_09820	0.79	-1.3
2,079,213	+		IAI47_09820	0.79	+0.5
2,079,214	-		IAI47_09820	0.79	-0.5
2,079,214	-		IAI47_09820	0.79	+0.6
2,079,214	-		IAI47_09820	0.79	-1.3
2,079,214	-		IAI47_09820	0.79	+1.3
2,079,214	-				+2.2
2,079,214	-		IAI47_09820	0.79	+0.4
2,079,257	-		IAI47_09820	0.81	-0.9
2,079,437	+		IAI47_09820	0.89	+0.1
2,079,438	-		IAI47_09820	0.89	-0.7
2,079,551	+				-0.8
2,079,552	-				-0.4
2,079,552	-				+1.8
2,079,552	-				-1.1
2,079,557	-				+0.6
2,079,562	+				-1.0
2,079,563	-				-0.1
2,079,563	-				+0.1
2,079,563	-				+0.1
2,079,563	-				-1.0
2,079,563	-				-1.6
2,079,641	+				-0.3
2,079,697	+				-1.1
2,079,697	+				-2.1
2,079,697	+				-1.8
2,079,697	+				-1.1
2,079,697	+				-0.5
2,079,697	+				+0.5
2,079,698	-				+1.0
2,079,698	-				-0.7
2,079,698	-				+1.6
2,079,698	-				+1.0
2,079,698	-				-0.3
2,079,711	-				+1.0
2,079,769	-		IAI47_09825	0.10	+0.3
2,079,769	-		IAI47_09825	0.10	-0.9
2,079,870	+		IAI47_09825	0.23	-0.4
2,079,870	+		IAI47_09825	0.23	+0.5
2,080,013	+		IAI47_09825	0.41	-0.2
2,080,013	+		IAI47_09825	0.41	-0.9
2,080,013	+		IAI47_09825	0.41	+0.5
2,080,014	-		IAI47_09825	0.42	+1.1
2,080,014	-		IAI47_09825	0.42	-0.1
2,080,133	+		IAI47_09825	0.57	-0.5
2,080,133	+		IAI47_09825	0.57	-0.0
2,080,134	-		IAI47_09825	0.57	-0.7
2,080,192	+		IAI47_09825	0.64	+1.0
2,080,192	+		IAI47_09825	0.64	-0.5
2,080,192	+		IAI47_09825	0.64	-0.3
2,080,193	-		IAI47_09825	0.65	-0.7
2,080,193	-		IAI47_09825	0.65	-0.6
2,080,193	-		IAI47_09825	0.65	-0.1
2,080,193	-		IAI47_09825	0.65	+0.6
2,080,197	+		IAI47_09825	0.65	-0.6
2,080,197	+		IAI47_09825	0.65	+2.8
2,080,197	+		IAI47_09825	0.65	-0.8
2,080,198	-		IAI47_09825	0.65	-1.1
2,080,198	-		IAI47_09825	0.65	-0.5
2,080,198	-		IAI47_09825	0.65	+0.6
2,080,198	-		IAI47_09825	0.65	-0.4
2,080,198	-		IAI47_09825	0.65	+0.2
2,080,198	-		IAI47_09825	0.65	+2.2
2,080,198	-		IAI47_09825	0.65	-0.3
2,080,198	-		IAI47_09825	0.65	+0.5
2,080,198	-		IAI47_09825	0.65	+0.8
2,080,200	+		IAI47_09825	0.66	+0.5
2,080,201	-		IAI47_09825	0.66	+0.5
2,080,201	-		IAI47_09825	0.66	-0.9
2,080,281	-		IAI47_09825	0.76	+0.8
2,080,281	-		IAI47_09825	0.76	-0.3
2,080,389	+		IAI47_09825	0.90	+0.6
2,080,458	+				-1.1
2,080,458	+				-1.6
2,080,458	+				-0.2
2,080,458	+				+0.9
2,080,459	-				-0.9
2,080,459	-				+0.3
2,080,459	-				+0.3
2,080,459	-				-1.5
2,080,459	-				-0.9
2,080,556	+				+0.2
2,080,557	-				+1.0
2,080,575	+				+2.8
2,080,576	-				+1.6
2,080,576	-				-0.2
2,080,576	-				-0.0
2,080,576	-				-0.4
2,080,601	-				-0.4
2,080,601	-				+0.1
2,080,601	-				-0.4
2,080,701	-				+0.9
2,080,701	-				-1.2