Experiment: Chloride 1000 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS18370 and BWI76_RS18375 are separated by 49 nucleotides BWI76_RS18375 and BWI76_RS18380 are separated by 454 nucleotides
BWI76_RS18370: BWI76_RS18370 - alpha-amylase, at 3,813,344 to 3,814,831
_RS18370
BWI76_RS18375: BWI76_RS18375 - hypothetical protein, at 3,814,881 to 3,815,294
_RS18375
BWI76_RS18380: BWI76_RS18380 - helix-turn-helix transcriptional regulator, at 3,815,749 to 3,816,372
_RS18380
Position (kb)
3814
3815
3816 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3814.104 kb on - strand, within BWI76_RS18370 at 3814.171 kb on + strand, within BWI76_RS18370 at 3814.291 kb on + strand, within BWI76_RS18370 at 3814.291 kb on + strand, within BWI76_RS18370 at 3814.299 kb on - strand, within BWI76_RS18370 at 3814.375 kb on + strand, within BWI76_RS18370 at 3814.492 kb on + strand, within BWI76_RS18370 at 3814.605 kb on - strand, within BWI76_RS18370 at 3814.838 kb on + strand at 3814.929 kb on - strand, within BWI76_RS18375 at 3815.114 kb on + strand, within BWI76_RS18375 at 3815.114 kb on + strand, within BWI76_RS18375 at 3815.122 kb on - strand, within BWI76_RS18375 at 3815.149 kb on - strand, within BWI76_RS18375 at 3815.173 kb on + strand, within BWI76_RS18375 at 3815.259 kb on + strand at 3815.267 kb on - strand at 3815.267 kb on - strand at 3815.337 kb on + strand at 3815.345 kb on - strand at 3815.354 kb on - strand at 3815.470 kb on + strand at 3815.635 kb on + strand at 3815.638 kb on - strand at 3815.644 kb on + strand at 3815.644 kb on + strand at 3815.644 kb on + strand at 3815.644 kb on + strand at 3815.644 kb on + strand at 3815.652 kb on - strand at 3815.652 kb on - strand at 3815.748 kb on - strand at 3815.753 kb on - strand at 3815.777 kb on + strand at 3815.791 kb on + strand at 3815.797 kb on + strand at 3815.797 kb on + strand at 3815.798 kb on - strand at 3815.802 kb on + strand at 3815.814 kb on - strand, within BWI76_RS18380 at 3815.842 kb on + strand, within BWI76_RS18380 at 3815.842 kb on + strand, within BWI76_RS18380 at 3815.842 kb on + strand, within BWI76_RS18380 at 3815.844 kb on + strand, within BWI76_RS18380 at 3815.850 kb on - strand, within BWI76_RS18380 at 3815.850 kb on - strand, within BWI76_RS18380 at 3815.852 kb on - strand, within BWI76_RS18380 at 3815.863 kb on - strand, within BWI76_RS18380 at 3815.872 kb on - strand, within BWI76_RS18380 at 3815.878 kb on - strand, within BWI76_RS18380 at 3815.880 kb on + strand, within BWI76_RS18380 at 3815.891 kb on - strand, within BWI76_RS18380 at 3815.907 kb on - strand, within BWI76_RS18380 at 3815.932 kb on + strand, within BWI76_RS18380 at 3815.967 kb on + strand, within BWI76_RS18380 at 3815.970 kb on + strand, within BWI76_RS18380 at 3815.973 kb on - strand, within BWI76_RS18380 at 3815.978 kb on - strand, within BWI76_RS18380 at 3815.980 kb on - strand, within BWI76_RS18380 at 3816.001 kb on - strand, within BWI76_RS18380 at 3816.001 kb on - strand, within BWI76_RS18380 at 3816.067 kb on - strand, within BWI76_RS18380 at 3816.068 kb on - strand at 3816.120 kb on + strand, within BWI76_RS18380 at 3816.138 kb on + strand at 3816.154 kb on - strand, within BWI76_RS18380 at 3816.156 kb on + strand, within BWI76_RS18380 at 3816.156 kb on + strand, within BWI76_RS18380 at 3816.158 kb on + strand, within BWI76_RS18380 at 3816.158 kb on + strand, within BWI76_RS18380 at 3816.166 kb on - strand, within BWI76_RS18380 at 3816.166 kb on - strand, within BWI76_RS18380 at 3816.173 kb on + strand, within BWI76_RS18380 at 3816.181 kb on - strand, within BWI76_RS18380 at 3816.211 kb on + strand, within BWI76_RS18380 at 3816.212 kb on - strand, within BWI76_RS18380 at 3816.216 kb on + strand, within BWI76_RS18380 at 3816.216 kb on + strand, within BWI76_RS18380 at 3816.216 kb on + strand, within BWI76_RS18380 at 3816.221 kb on + strand, within BWI76_RS18380 at 3816.221 kb on + strand, within BWI76_RS18380 at 3816.226 kb on + strand, within BWI76_RS18380 at 3816.229 kb on - strand, within BWI76_RS18380 at 3816.229 kb on - strand, within BWI76_RS18380 at 3816.231 kb on + strand, within BWI76_RS18380 at 3816.231 kb on + strand, within BWI76_RS18380 at 3816.231 kb on + strand, within BWI76_RS18380 at 3816.231 kb on + strand, within BWI76_RS18380 at 3816.231 kb on + strand at 3816.236 kb on + strand, within BWI76_RS18380 at 3816.237 kb on + strand, within BWI76_RS18380 at 3816.239 kb on - strand, within BWI76_RS18380 at 3816.239 kb on - strand, within BWI76_RS18380 at 3816.239 kb on - strand, within BWI76_RS18380 at 3816.243 kb on + strand, within BWI76_RS18380 at 3816.243 kb on + strand, within BWI76_RS18380 at 3816.244 kb on - strand, within BWI76_RS18380 at 3816.251 kb on - strand at 3816.251 kb on - strand, within BWI76_RS18380 at 3816.259 kb on - strand, within BWI76_RS18380 at 3816.275 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chloride 1000 mM remove 3,814,104 - BWI76_RS18370 0.51 -0.0 3,814,171 + BWI76_RS18370 0.56 +0.2 3,814,291 + BWI76_RS18370 0.64 +1.0 3,814,291 + BWI76_RS18370 0.64 -0.6 3,814,299 - BWI76_RS18370 0.64 -0.9 3,814,375 + BWI76_RS18370 0.69 -0.3 3,814,492 + BWI76_RS18370 0.77 +0.2 3,814,605 - BWI76_RS18370 0.85 +0.0 3,814,838 + +0.4 3,814,929 - BWI76_RS18375 0.12 +0.3 3,815,114 + BWI76_RS18375 0.56 -0.9 3,815,114 + BWI76_RS18375 0.56 -2.0 3,815,122 - BWI76_RS18375 0.58 -0.4 3,815,149 - BWI76_RS18375 0.65 -0.8 3,815,173 + BWI76_RS18375 0.71 -3.1 3,815,259 + -0.4 3,815,267 - -0.3 3,815,267 - -0.0 3,815,337 + -1.6 3,815,345 - -0.2 3,815,354 - -0.5 3,815,470 + +0.1 3,815,635 + -0.8 3,815,638 - -1.0 3,815,644 + -0.5 3,815,644 + +0.4 3,815,644 + -0.1 3,815,644 + -0.4 3,815,644 + -0.2 3,815,652 - +0.6 3,815,652 - -0.2 3,815,748 - -0.9 3,815,753 - +0.3 3,815,777 + +1.1 3,815,791 + -1.4 3,815,797 + -0.8 3,815,797 + -1.8 3,815,798 - +0.8 3,815,802 + -0.3 3,815,814 - BWI76_RS18380 0.10 -0.3 3,815,842 + BWI76_RS18380 0.15 -0.0 3,815,842 + BWI76_RS18380 0.15 +1.3 3,815,842 + BWI76_RS18380 0.15 -1.7 3,815,844 + BWI76_RS18380 0.15 -0.5 3,815,850 - BWI76_RS18380 0.16 -0.3 3,815,850 - BWI76_RS18380 0.16 -1.2 3,815,852 - BWI76_RS18380 0.17 -1.2 3,815,863 - BWI76_RS18380 0.18 -1.8 3,815,872 - BWI76_RS18380 0.20 +0.2 3,815,878 - BWI76_RS18380 0.21 +0.2 3,815,880 + BWI76_RS18380 0.21 -0.7 3,815,891 - BWI76_RS18380 0.23 -0.9 3,815,907 - BWI76_RS18380 0.25 -0.0 3,815,932 + BWI76_RS18380 0.29 -1.9 3,815,967 + BWI76_RS18380 0.35 -0.6 3,815,970 + BWI76_RS18380 0.35 -1.2 3,815,973 - BWI76_RS18380 0.36 +1.3 3,815,978 - BWI76_RS18380 0.37 -1.3 3,815,980 - BWI76_RS18380 0.37 -0.4 3,816,001 - BWI76_RS18380 0.40 +0.5 3,816,001 - BWI76_RS18380 0.40 +0.1 3,816,067 - BWI76_RS18380 0.51 -0.8 3,816,068 - -0.6 3,816,120 + BWI76_RS18380 0.59 -1.0 3,816,138 + -1.0 3,816,154 - BWI76_RS18380 0.65 -0.2 3,816,156 + BWI76_RS18380 0.65 +0.1 3,816,156 + BWI76_RS18380 0.65 -0.9 3,816,158 + BWI76_RS18380 0.66 +0.3 3,816,158 + BWI76_RS18380 0.66 -1.0 3,816,166 - BWI76_RS18380 0.67 -0.0 3,816,166 - BWI76_RS18380 0.67 -0.0 3,816,173 + BWI76_RS18380 0.68 +1.3 3,816,181 - BWI76_RS18380 0.69 +1.2 3,816,211 + BWI76_RS18380 0.74 -0.1 3,816,212 - BWI76_RS18380 0.74 -0.7 3,816,216 + BWI76_RS18380 0.75 -0.9 3,816,216 + BWI76_RS18380 0.75 -0.5 3,816,216 + BWI76_RS18380 0.75 +0.1 3,816,221 + BWI76_RS18380 0.76 +0.3 3,816,221 + BWI76_RS18380 0.76 -0.8 3,816,226 + BWI76_RS18380 0.76 -1.0 3,816,229 - BWI76_RS18380 0.77 -0.7 3,816,229 - BWI76_RS18380 0.77 -0.1 3,816,231 + BWI76_RS18380 0.77 -0.3 3,816,231 + BWI76_RS18380 0.77 +3.0 3,816,231 + BWI76_RS18380 0.77 -1.0 3,816,231 + BWI76_RS18380 0.77 -0.5 3,816,231 + +1.0 3,816,236 + BWI76_RS18380 0.78 +0.1 3,816,237 + BWI76_RS18380 0.78 -1.5 3,816,239 - BWI76_RS18380 0.79 +1.0 3,816,239 - BWI76_RS18380 0.79 +0.2 3,816,239 - BWI76_RS18380 0.79 +2.0 3,816,243 + BWI76_RS18380 0.79 -1.0 3,816,243 + BWI76_RS18380 0.79 +1.7 3,816,244 - BWI76_RS18380 0.79 +0.2 3,816,251 - -0.0 3,816,251 - BWI76_RS18380 0.80 -1.2 3,816,259 - BWI76_RS18380 0.82 -1.7 3,816,275 - -0.2
Or see this region's nucleotide sequence