Experiment: Chloride 1000 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS16520 and BWI76_RS16525 are separated by 298 nucleotides BWI76_RS16525 and BWI76_RS16530 are separated by 31 nucleotides BWI76_RS16530 and BWI76_RS16535 are separated by 230 nucleotides
BWI76_RS16520: BWI76_RS16520 - Bcr/CflA family multidrug efflux MFS transporter, at 3,424,569 to 3,425,753
_RS16520
BWI76_RS16525: BWI76_RS16525 - cyclopropane-fatty-acyl-phospholipid synthase, at 3,426,052 to 3,427,203
_RS16525
BWI76_RS16530: BWI76_RS16530 - riboflavin synthase subunit alpha, at 3,427,235 to 3,427,876
_RS16530
BWI76_RS16535: BWI76_RS16535 - MATE family efflux transporter, at 3,428,107 to 3,429,480
_RS16535
Position (kb)
3426
3427
3428 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3425.116 kb on - strand, within BWI76_RS16520 at 3425.209 kb on - strand, within BWI76_RS16520 at 3425.305 kb on - strand, within BWI76_RS16520 at 3425.341 kb on - strand, within BWI76_RS16520 at 3425.439 kb on + strand, within BWI76_RS16520 at 3425.672 kb on + strand at 3425.711 kb on + strand at 3425.711 kb on + strand at 3425.747 kb on + strand at 3425.937 kb on + strand at 3426.013 kb on + strand at 3426.013 kb on + strand at 3426.214 kb on + strand, within BWI76_RS16525 at 3426.658 kb on - strand, within BWI76_RS16525 at 3426.928 kb on - strand, within BWI76_RS16525 at 3427.025 kb on + strand, within BWI76_RS16525 at 3427.174 kb on + strand at 3427.186 kb on - strand at 3427.999 kb on + strand at 3428.019 kb on - strand at 3428.091 kb on + strand at 3428.091 kb on + strand at 3428.148 kb on + strand at 3428.176 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chloride 1000 mM remove 3,425,116 - BWI76_RS16520 0.46 +0.1 3,425,209 - BWI76_RS16520 0.54 -0.0 3,425,305 - BWI76_RS16520 0.62 -0.2 3,425,341 - BWI76_RS16520 0.65 +0.3 3,425,439 + BWI76_RS16520 0.73 -0.1 3,425,672 + -0.5 3,425,711 + +0.4 3,425,711 + -0.7 3,425,747 + +0.6 3,425,937 + -0.6 3,426,013 + -0.9 3,426,013 + -0.5 3,426,214 + BWI76_RS16525 0.14 -0.5 3,426,658 - BWI76_RS16525 0.53 -1.5 3,426,928 - BWI76_RS16525 0.76 -1.9 3,427,025 + BWI76_RS16525 0.84 +0.0 3,427,174 + -0.8 3,427,186 - -0.9 3,427,999 + +0.0 3,428,019 - +0.1 3,428,091 + -3.5 3,428,091 + -0.8 3,428,148 + +0.2 3,428,176 + +0.5
Or see this region's nucleotide sequence