Experiment: Chloride 1000 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS05015 and BWI76_RS05020 are separated by 164 nucleotides BWI76_RS05020 and BWI76_RS05025 overlap by 1 nucleotides BWI76_RS05025 and BWI76_RS05030 are separated by 72 nucleotides
BWI76_RS05015: BWI76_RS05015 - transcriptional regulator, at 1,051,627 to 1,052,082
_RS05015
BWI76_RS05020: BWI76_RS05020 - sugar fermentation stimulation protein SfsA, at 1,052,247 to 1,052,963
_RS05020
BWI76_RS05025: BWI76_RS05025 - 2'-5' RNA ligase, at 1,052,963 to 1,053,499
_RS05025
BWI76_RS05030: BWI76_RS05030 - ATP-dependent helicase, at 1,053,572 to 1,056,001
_RS05030
Position (kb)
1052
1053
1054 Strain fitness (log2 ratio)
-2
-1
0
1 at 1052.065 kb on + strand at 1052.187 kb on - strand at 1052.187 kb on - strand at 1052.187 kb on - strand at 1052.195 kb on - strand at 1052.195 kb on - strand at 1052.197 kb on - strand at 1052.264 kb on + strand at 1052.286 kb on - strand at 1052.291 kb on - strand at 1052.330 kb on + strand, within BWI76_RS05020 at 1052.381 kb on - strand, within BWI76_RS05020 at 1052.382 kb on + strand, within BWI76_RS05020 at 1052.390 kb on - strand, within BWI76_RS05020 at 1052.395 kb on + strand, within BWI76_RS05020 at 1052.395 kb on + strand, within BWI76_RS05020 at 1052.426 kb on - strand, within BWI76_RS05020 at 1052.524 kb on + strand, within BWI76_RS05020 at 1052.531 kb on - strand, within BWI76_RS05020 at 1052.543 kb on + strand, within BWI76_RS05020 at 1052.656 kb on + strand, within BWI76_RS05020 at 1052.779 kb on - strand, within BWI76_RS05020 at 1052.809 kb on - strand, within BWI76_RS05020 at 1052.823 kb on - strand, within BWI76_RS05020 at 1052.851 kb on + strand, within BWI76_RS05020 at 1052.860 kb on - strand, within BWI76_RS05020 at 1052.862 kb on + strand, within BWI76_RS05020 at 1052.871 kb on - strand, within BWI76_RS05020 at 1052.881 kb on - strand, within BWI76_RS05020 at 1053.280 kb on + strand, within BWI76_RS05025 at 1053.428 kb on + strand, within BWI76_RS05025 at 1053.463 kb on + strand at 1053.531 kb on + strand at 1053.840 kb on - strand, within BWI76_RS05030 at 1054.295 kb on - strand, within BWI76_RS05030 at 1054.333 kb on + strand, within BWI76_RS05030 at 1054.341 kb on - strand, within BWI76_RS05030 at 1054.440 kb on + strand, within BWI76_RS05030 at 1054.442 kb on + strand, within BWI76_RS05030
Per-strain Table
Position Strand Gene LocusTag Fraction Chloride 1000 mM remove 1,052,065 + -1.1 1,052,187 - +0.0 1,052,187 - +1.0 1,052,187 - -0.3 1,052,195 - -0.1 1,052,195 - -0.5 1,052,197 - +0.3 1,052,264 + +0.1 1,052,286 - +0.2 1,052,291 - +0.0 1,052,330 + BWI76_RS05020 0.12 +1.4 1,052,381 - BWI76_RS05020 0.19 +0.2 1,052,382 + BWI76_RS05020 0.19 +1.7 1,052,390 - BWI76_RS05020 0.20 -0.1 1,052,395 + BWI76_RS05020 0.21 -1.0 1,052,395 + BWI76_RS05020 0.21 +0.5 1,052,426 - BWI76_RS05020 0.25 -0.3 1,052,524 + BWI76_RS05020 0.39 -1.8 1,052,531 - BWI76_RS05020 0.40 -0.1 1,052,543 + BWI76_RS05020 0.41 -0.3 1,052,656 + BWI76_RS05020 0.57 +0.6 1,052,779 - BWI76_RS05020 0.74 -0.0 1,052,809 - BWI76_RS05020 0.78 -0.1 1,052,823 - BWI76_RS05020 0.80 -0.2 1,052,851 + BWI76_RS05020 0.84 +0.6 1,052,860 - BWI76_RS05020 0.85 -0.3 1,052,862 + BWI76_RS05020 0.86 -0.1 1,052,871 - BWI76_RS05020 0.87 -0.4 1,052,881 - BWI76_RS05020 0.88 -0.5 1,053,280 + BWI76_RS05025 0.59 -0.5 1,053,428 + BWI76_RS05025 0.87 -1.4 1,053,463 + +0.5 1,053,531 + -1.5 1,053,840 - BWI76_RS05030 0.11 -0.2 1,054,295 - BWI76_RS05030 0.30 +0.5 1,054,333 + BWI76_RS05030 0.31 -0.4 1,054,341 - BWI76_RS05030 0.32 -0.3 1,054,440 + BWI76_RS05030 0.36 -0.1 1,054,442 + BWI76_RS05030 0.36 -0.1
Or see this region's nucleotide sequence