Experiment: Chloride 1000 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS04270 and BWI76_RS04275 are separated by 99 nucleotides BWI76_RS04275 and BWI76_RS04280 are separated by 120 nucleotides BWI76_RS04280 and BWI76_RS04285 are separated by 46 nucleotides BWI76_RS04285 and BWI76_RS04290 are separated by 88 nucleotides
BWI76_RS04270: BWI76_RS04270 - transaldolase, at 879,739 to 880,692
_RS04270
BWI76_RS04275: BWI76_RS04275 - molybdopterin adenylyltransferase, at 880,792 to 881,379
_RS04275
BWI76_RS04280: BWI76_RS04280 - MFS transporter, at 881,500 to 882,810
_RS04280
BWI76_RS04285: BWI76_RS04285 - hypothetical protein, at 882,857 to 883,423
_RS04285
BWI76_RS04290: BWI76_RS04290 - hypothetical protein, at 883,512 to 884,261
_RS04290
Position (kb) 881
882
883 Strain fitness (log2 ratio) -2
-1
0
1 at 880.516 kb on - strand, within BWI76_RS04270 at 880.517 kb on + strand, within BWI76_RS04270 at 880.729 kb on - strand at 880.729 kb on - strand at 880.735 kb on + strand at 880.854 kb on + strand, within BWI76_RS04275 at 880.862 kb on - strand at 880.890 kb on - strand, within BWI76_RS04275 at 880.899 kb on + strand, within BWI76_RS04275 at 880.899 kb on + strand, within BWI76_RS04275 at 880.944 kb on + strand, within BWI76_RS04275 at 880.944 kb on + strand, within BWI76_RS04275 at 881.101 kb on + strand, within BWI76_RS04275 at 881.177 kb on + strand, within BWI76_RS04275 at 881.177 kb on + strand, within BWI76_RS04275 at 881.185 kb on - strand, within BWI76_RS04275 at 881.215 kb on + strand, within BWI76_RS04275 at 881.508 kb on - strand at 881.704 kb on - strand, within BWI76_RS04280 at 881.872 kb on + strand, within BWI76_RS04280 at 882.024 kb on + strand, within BWI76_RS04280 at 882.032 kb on - strand, within BWI76_RS04280 at 882.032 kb on - strand, within BWI76_RS04280 at 882.050 kb on + strand, within BWI76_RS04280 at 882.192 kb on + strand, within BWI76_RS04280 at 882.343 kb on - strand, within BWI76_RS04280 at 882.614 kb on + strand, within BWI76_RS04280 at 882.622 kb on - strand, within BWI76_RS04280 at 882.819 kb on + strand at 882.875 kb on + strand at 882.954 kb on - strand, within BWI76_RS04285 at 882.955 kb on - strand, within BWI76_RS04285 at 883.005 kb on + strand, within BWI76_RS04285 at 883.074 kb on + strand, within BWI76_RS04285 at 883.101 kb on - strand, within BWI76_RS04285 at 883.111 kb on + strand, within BWI76_RS04285 at 883.119 kb on - strand, within BWI76_RS04285 at 883.119 kb on - strand, within BWI76_RS04285 at 883.125 kb on - strand, within BWI76_RS04285 at 883.125 kb on - strand, within BWI76_RS04285 at 883.318 kb on + strand, within BWI76_RS04285 at 883.350 kb on - strand, within BWI76_RS04285 at 883.365 kb on - strand, within BWI76_RS04285 at 883.393 kb on - strand at 883.408 kb on + strand at 883.416 kb on - strand at 883.472 kb on - strand at 883.510 kb on + strand at 883.574 kb on + strand at 883.582 kb on - strand at 883.582 kb on - strand at 883.590 kb on + strand, within BWI76_RS04290 at 883.636 kb on + strand, within BWI76_RS04290 at 883.644 kb on - strand, within BWI76_RS04290 at 883.676 kb on + strand, within BWI76_RS04290 at 883.771 kb on + strand, within BWI76_RS04290 at 883.775 kb on + strand, within BWI76_RS04290 at 883.778 kb on - strand, within BWI76_RS04290 at 883.779 kb on - strand, within BWI76_RS04290 at 883.789 kb on - strand, within BWI76_RS04290 at 883.808 kb on + strand, within BWI76_RS04290
Per-strain Table
Position Strand Gene LocusTag Fraction Chloride 1000 mM remove 880,516 - BWI76_RS04270 0.81 -0.2 880,517 + BWI76_RS04270 0.82 -1.0 880,729 - -0.3 880,729 - -0.4 880,735 + -0.1 880,854 + BWI76_RS04275 0.11 -0.8 880,862 - +0.7 880,890 - BWI76_RS04275 0.17 -0.1 880,899 + BWI76_RS04275 0.18 +0.7 880,899 + BWI76_RS04275 0.18 +0.0 880,944 + BWI76_RS04275 0.26 -0.1 880,944 + BWI76_RS04275 0.26 -2.1 881,101 + BWI76_RS04275 0.53 -0.2 881,177 + BWI76_RS04275 0.65 +0.8 881,177 + BWI76_RS04275 0.65 -0.1 881,185 - BWI76_RS04275 0.67 +0.3 881,215 + BWI76_RS04275 0.72 +0.1 881,508 - -0.4 881,704 - BWI76_RS04280 0.16 -0.4 881,872 + BWI76_RS04280 0.28 +0.0 882,024 + BWI76_RS04280 0.40 -0.4 882,032 - BWI76_RS04280 0.41 -0.2 882,032 - BWI76_RS04280 0.41 -0.1 882,050 + BWI76_RS04280 0.42 +0.1 882,192 + BWI76_RS04280 0.53 -0.3 882,343 - BWI76_RS04280 0.64 -0.2 882,614 + BWI76_RS04280 0.85 -0.2 882,622 - BWI76_RS04280 0.86 -1.3 882,819 + -0.1 882,875 + -0.4 882,954 - BWI76_RS04285 0.17 +0.4 882,955 - BWI76_RS04285 0.17 +0.0 883,005 + BWI76_RS04285 0.26 -2.3 883,074 + BWI76_RS04285 0.38 +0.3 883,101 - BWI76_RS04285 0.43 +0.2 883,111 + BWI76_RS04285 0.45 +0.5 883,119 - BWI76_RS04285 0.46 -0.6 883,119 - BWI76_RS04285 0.46 +0.4 883,125 - BWI76_RS04285 0.47 -0.3 883,125 - BWI76_RS04285 0.47 -0.2 883,318 + BWI76_RS04285 0.81 -0.2 883,350 - BWI76_RS04285 0.87 +0.2 883,365 - BWI76_RS04285 0.90 -0.6 883,393 - +0.1 883,408 + +0.4 883,416 - +0.1 883,472 - -0.3 883,510 + -0.2 883,574 + -0.1 883,582 - -1.9 883,582 - +0.9 883,590 + BWI76_RS04290 0.10 +0.3 883,636 + BWI76_RS04290 0.17 -0.0 883,644 - BWI76_RS04290 0.18 -1.2 883,676 + BWI76_RS04290 0.22 -0.1 883,771 + BWI76_RS04290 0.35 +0.4 883,775 + BWI76_RS04290 0.35 -0.8 883,778 - BWI76_RS04290 0.35 +0.4 883,779 - BWI76_RS04290 0.36 -0.4 883,789 - BWI76_RS04290 0.37 +0.4 883,808 + BWI76_RS04290 0.39 +0.2
Or see this region's nucleotide sequence