Experiment: Chloride 1000 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS02145 and BWI76_RS02150 overlap by 17 nucleotides BWI76_RS02150 and BWI76_RS02155 are separated by 10 nucleotides BWI76_RS02155 and BWI76_RS02160 overlap by 22 nucleotides
BWI76_RS02145: BWI76_RS02145 - allose kinase, at 446,104 to 447,030
_RS02145
BWI76_RS02150: BWI76_RS02150 - allulose-6-phosphate 3-epimerase, at 447,014 to 447,709
_RS02150
BWI76_RS02155: BWI76_RS02155 - D-allose transporter subunit, at 447,720 to 448,700
_RS02155
BWI76_RS02160: BWI76_RS02160 - D-allose transporter ATP-binding protein, at 448,679 to 450,211
_RS02160
Position (kb) 447
448
449 Strain fitness (log2 ratio) -2
-1
0
1 at 446.725 kb on - strand, within BWI76_RS02145 at 446.725 kb on - strand, within BWI76_RS02145 at 446.725 kb on - strand, within BWI76_RS02145 at 446.730 kb on + strand, within BWI76_RS02145 at 446.913 kb on + strand, within BWI76_RS02145 at 446.916 kb on - strand, within BWI76_RS02145 at 446.943 kb on + strand at 446.985 kb on - strand at 446.985 kb on - strand at 446.998 kb on - strand at 447.029 kb on - strand at 447.123 kb on - strand, within BWI76_RS02150 at 447.481 kb on - strand, within BWI76_RS02150 at 447.487 kb on + strand, within BWI76_RS02150 at 447.492 kb on + strand, within BWI76_RS02150 at 447.500 kb on - strand, within BWI76_RS02150 at 447.500 kb on - strand, within BWI76_RS02150 at 447.581 kb on + strand, within BWI76_RS02150 at 447.676 kb on + strand at 447.676 kb on + strand at 447.676 kb on + strand at 447.684 kb on - strand at 447.686 kb on - strand at 447.686 kb on - strand at 447.694 kb on - strand at 447.694 kb on - strand at 447.792 kb on + strand at 448.074 kb on - strand, within BWI76_RS02155 at 448.221 kb on + strand, within BWI76_RS02155 at 448.229 kb on - strand, within BWI76_RS02155 at 448.412 kb on + strand, within BWI76_RS02155 at 448.412 kb on + strand, within BWI76_RS02155 at 448.564 kb on - strand, within BWI76_RS02155 at 448.638 kb on - strand at 448.638 kb on - strand at 448.766 kb on + strand at 448.774 kb on - strand at 448.774 kb on - strand at 448.799 kb on - strand at 448.853 kb on + strand, within BWI76_RS02160 at 448.888 kb on + strand, within BWI76_RS02160 at 448.924 kb on + strand, within BWI76_RS02160 at 448.997 kb on - strand, within BWI76_RS02160 at 449.113 kb on - strand, within BWI76_RS02160 at 449.124 kb on + strand, within BWI76_RS02160 at 449.129 kb on + strand, within BWI76_RS02160 at 449.137 kb on - strand, within BWI76_RS02160 at 449.137 kb on - strand, within BWI76_RS02160 at 449.218 kb on - strand, within BWI76_RS02160 at 449.308 kb on + strand, within BWI76_RS02160 at 449.495 kb on - strand, within BWI76_RS02160 at 449.520 kb on + strand, within BWI76_RS02160 at 449.593 kb on - strand, within BWI76_RS02160
Per-strain Table
Position Strand Gene LocusTag Fraction Chloride 1000 mM remove 446,725 - BWI76_RS02145 0.67 -0.2 446,725 - BWI76_RS02145 0.67 -1.6 446,725 - BWI76_RS02145 0.67 +0.3 446,730 + BWI76_RS02145 0.68 -0.2 446,913 + BWI76_RS02145 0.87 -1.1 446,916 - BWI76_RS02145 0.88 -0.2 446,943 + -0.2 446,985 - +0.2 446,985 - -0.3 446,998 - -0.4 447,029 - -1.8 447,123 - BWI76_RS02150 0.16 -0.0 447,481 - BWI76_RS02150 0.67 +0.3 447,487 + BWI76_RS02150 0.68 +0.1 447,492 + BWI76_RS02150 0.69 -0.7 447,500 - BWI76_RS02150 0.70 -0.1 447,500 - BWI76_RS02150 0.70 -0.1 447,581 + BWI76_RS02150 0.81 -0.6 447,676 + +1.3 447,676 + +0.8 447,676 + +0.1 447,684 - +0.6 447,686 - -0.2 447,686 - +0.1 447,694 - +0.0 447,694 - -0.0 447,792 + -0.7 448,074 - BWI76_RS02155 0.36 -0.9 448,221 + BWI76_RS02155 0.51 -0.9 448,229 - BWI76_RS02155 0.52 -0.3 448,412 + BWI76_RS02155 0.71 -0.2 448,412 + BWI76_RS02155 0.71 -0.7 448,564 - BWI76_RS02155 0.86 -1.1 448,638 - -0.2 448,638 - -0.4 448,766 + +0.3 448,774 - -0.9 448,774 - +0.1 448,799 - -1.2 448,853 + BWI76_RS02160 0.11 +0.1 448,888 + BWI76_RS02160 0.14 +0.5 448,924 + BWI76_RS02160 0.16 +0.3 448,997 - BWI76_RS02160 0.21 -1.5 449,113 - BWI76_RS02160 0.28 -0.2 449,124 + BWI76_RS02160 0.29 -0.6 449,129 + BWI76_RS02160 0.29 +0.3 449,137 - BWI76_RS02160 0.30 -0.2 449,137 - BWI76_RS02160 0.30 +0.6 449,218 - BWI76_RS02160 0.35 +0.4 449,308 + BWI76_RS02160 0.41 -0.3 449,495 - BWI76_RS02160 0.53 -0.1 449,520 + BWI76_RS02160 0.55 +0.4 449,593 - BWI76_RS02160 0.60 -0.5
Or see this region's nucleotide sequence