Experiment: MoLS4 with Chlorate 3.125 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_3068 and DvMF_3069 are separated by 101 nucleotides DvMF_3069 and DvMF_3070 are separated by 147 nucleotides DvMF_3070 and DvMF_3071 are separated by 467 nucleotides
DvMF_3068: DvMF_3068 - hypothetical protein (RefSeq), at 3,874,640 to 3,875,017
_3068
DvMF_3069: DvMF_3069 - hypothetical protein (RefSeq), at 3,875,119 to 3,875,436
_3069
DvMF_3070: DvMF_3070 - hypothetical protein (RefSeq), at 3,875,584 to 3,876,147
_3070
DvMF_3071: DvMF_3071 - type IV pilus assembly PilZ (RefSeq), at 3,876,615 to 3,877,106
_3071
Position (kb)
3875
3876
3877 Strain fitness (log2 ratio)
-2
-1
0
1 at 3874.663 kb on - strand at 3874.701 kb on + strand, within DvMF_3068 at 3874.946 kb on + strand, within DvMF_3068 at 3875.035 kb on + strand at 3875.054 kb on + strand at 3875.356 kb on + strand, within DvMF_3069 at 3875.382 kb on + strand, within DvMF_3069 at 3875.421 kb on + strand at 3875.469 kb on - strand at 3875.560 kb on - strand at 3875.708 kb on - strand, within DvMF_3070 at 3875.741 kb on - strand, within DvMF_3070 at 3875.741 kb on - strand, within DvMF_3070 at 3875.984 kb on + strand, within DvMF_3070 at 3876.205 kb on - strand at 3876.346 kb on + strand at 3876.379 kb on + strand at 3876.865 kb on + strand, within DvMF_3071
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with Chlorate 3.125 mM remove 3,874,663 - -0.6 3,874,701 + DvMF_3068 0.16 -0.2 3,874,946 + DvMF_3068 0.81 -0.9 3,875,035 + -0.3 3,875,054 + -0.1 3,875,356 + DvMF_3069 0.75 -0.5 3,875,382 + DvMF_3069 0.83 -0.8 3,875,421 + -0.7 3,875,469 - +0.1 3,875,560 - -0.9 3,875,708 - DvMF_3070 0.22 -1.5 3,875,741 - DvMF_3070 0.28 -1.9 3,875,741 - DvMF_3070 0.28 -1.2 3,875,984 + DvMF_3070 0.71 +0.2 3,876,205 - -0.1 3,876,346 + -0.7 3,876,379 + -0.7 3,876,865 + DvMF_3071 0.51 -0.1
Or see this region's nucleotide sequence