Experiment: MoLS4 with Chlorate 3.125 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_3049 and DvMF_3050 are separated by 624 nucleotides DvMF_3050 and DvMF_3051 are separated by 359 nucleotides
DvMF_3049: DvMF_3049 - protein of unknown function DUF554 (RefSeq), at 3,846,884 to 3,847,570
_3049
DvMF_3050: DvMF_3050 - excinuclease ABC, A subunit (RefSeq), at 3,848,195 to 3,851,590
_3050
DvMF_3051: DvMF_3051 - protein of unknown function DUF88 (RefSeq), at 3,851,950 to 3,853,206
_3051
Position (kb)
3848
3849
3850
3851
3852 Strain fitness (log2 ratio)
-1
0
1
2 at 3847.218 kb on - strand, within DvMF_3049 at 3847.300 kb on - strand, within DvMF_3049 at 3847.383 kb on + strand, within DvMF_3049 at 3847.466 kb on - strand, within DvMF_3049 at 3847.591 kb on + strand at 3847.682 kb on - strand at 3847.948 kb on - strand at 3847.948 kb on - strand at 3848.006 kb on + strand at 3848.082 kb on + strand at 3848.183 kb on - strand at 3848.261 kb on - strand at 3848.711 kb on + strand, within DvMF_3050 at 3849.004 kb on - strand, within DvMF_3050 at 3849.092 kb on + strand, within DvMF_3050 at 3849.138 kb on + strand, within DvMF_3050 at 3849.200 kb on - strand, within DvMF_3050 at 3849.221 kb on + strand, within DvMF_3050 at 3849.440 kb on - strand, within DvMF_3050 at 3849.440 kb on - strand, within DvMF_3050 at 3849.442 kb on + strand, within DvMF_3050 at 3849.926 kb on - strand, within DvMF_3050 at 3849.954 kb on - strand, within DvMF_3050 at 3850.700 kb on + strand, within DvMF_3050 at 3850.723 kb on + strand, within DvMF_3050 at 3850.841 kb on + strand, within DvMF_3050 at 3851.347 kb on - strand at 3851.348 kb on + strand at 3851.665 kb on - strand at 3851.786 kb on + strand at 3851.833 kb on - strand at 3851.905 kb on - strand at 3851.905 kb on - strand at 3852.075 kb on - strand at 3852.095 kb on + strand, within DvMF_3051 at 3852.095 kb on + strand, within DvMF_3051 at 3852.222 kb on + strand, within DvMF_3051 at 3852.492 kb on - strand, within DvMF_3051 at 3852.530 kb on - strand, within DvMF_3051
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with Chlorate 3.125 mM remove 3,847,218 - DvMF_3049 0.49 -0.7 3,847,300 - DvMF_3049 0.61 +0.1 3,847,383 + DvMF_3049 0.73 +0.2 3,847,466 - DvMF_3049 0.85 -0.3 3,847,591 + -0.7 3,847,682 - -0.1 3,847,948 - -1.0 3,847,948 - +0.1 3,848,006 + -0.3 3,848,082 + -1.1 3,848,183 - -0.3 3,848,261 - +0.1 3,848,711 + DvMF_3050 0.15 -0.3 3,849,004 - DvMF_3050 0.24 -0.7 3,849,092 + DvMF_3050 0.26 -0.4 3,849,138 + DvMF_3050 0.28 -0.3 3,849,200 - DvMF_3050 0.30 -0.0 3,849,221 + DvMF_3050 0.30 -0.5 3,849,440 - DvMF_3050 0.37 -0.3 3,849,440 - DvMF_3050 0.37 +0.9 3,849,442 + DvMF_3050 0.37 +0.2 3,849,926 - DvMF_3050 0.51 +0.1 3,849,954 - DvMF_3050 0.52 +2.5 3,850,700 + DvMF_3050 0.74 +0.1 3,850,723 + DvMF_3050 0.74 -0.4 3,850,841 + DvMF_3050 0.78 -0.5 3,851,347 - -1.0 3,851,348 + -0.6 3,851,665 - -0.4 3,851,786 + -0.5 3,851,833 - -0.7 3,851,905 - -0.6 3,851,905 - +0.5 3,852,075 - -0.4 3,852,095 + DvMF_3051 0.12 -0.1 3,852,095 + DvMF_3051 0.12 +0.2 3,852,222 + DvMF_3051 0.22 -0.1 3,852,492 - DvMF_3051 0.43 -0.0 3,852,530 - DvMF_3051 0.46 -0.4
Or see this region's nucleotide sequence