Experiment: MoLS4 with Chlorate 3.125 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2778 and DvMF_2779 overlap by 4 nucleotides DvMF_2779 and DvMF_2780 are separated by 504 nucleotides
DvMF_2778: DvMF_2778 - PAS/PAC sensor signal transduction histidine kinase (RefSeq), at 3,512,891 to 3,515,362
_2778
DvMF_2779: DvMF_2779 - PAS modulated sigma54 specific transcriptional regulator, Fis family (RefSeq), at 3,515,359 to 3,517,572
_2779
DvMF_2780: DvMF_2780 - ABC transporter, periplasmic substrate-binding protein (RefSeq), at 3,518,077 to 3,518,898
_2780
Position (kb)
3515
3516
3517
3518 Strain fitness (log2 ratio)
-1
0
1
2 at 3514.551 kb on + strand, within DvMF_2778 at 3514.668 kb on - strand, within DvMF_2778 at 3514.686 kb on + strand, within DvMF_2778 at 3514.936 kb on - strand, within DvMF_2778 at 3515.004 kb on - strand, within DvMF_2778 at 3515.493 kb on + strand at 3515.646 kb on - strand, within DvMF_2779 at 3515.698 kb on - strand, within DvMF_2779 at 3515.778 kb on + strand, within DvMF_2779 at 3515.778 kb on + strand, within DvMF_2779 at 3515.813 kb on + strand, within DvMF_2779 at 3515.849 kb on + strand, within DvMF_2779 at 3516.187 kb on - strand, within DvMF_2779 at 3516.218 kb on - strand, within DvMF_2779 at 3516.323 kb on - strand, within DvMF_2779 at 3516.418 kb on - strand, within DvMF_2779 at 3516.418 kb on - strand, within DvMF_2779 at 3516.418 kb on - strand, within DvMF_2779 at 3516.731 kb on - strand, within DvMF_2779 at 3516.763 kb on - strand, within DvMF_2779 at 3516.763 kb on - strand, within DvMF_2779 at 3516.974 kb on + strand, within DvMF_2779 at 3516.982 kb on - strand, within DvMF_2779 at 3516.982 kb on - strand, within DvMF_2779 at 3517.008 kb on + strand, within DvMF_2779 at 3517.172 kb on - strand, within DvMF_2779 at 3517.825 kb on + strand at 3517.923 kb on + strand at 3518.130 kb on + strand at 3518.438 kb on - strand, within DvMF_2780 at 3518.559 kb on - strand, within DvMF_2780
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with Chlorate 3.125 mM remove 3,514,551 + DvMF_2778 0.67 +0.3 3,514,668 - DvMF_2778 0.72 -0.1 3,514,686 + DvMF_2778 0.73 -0.1 3,514,936 - DvMF_2778 0.83 -0.4 3,515,004 - DvMF_2778 0.85 -0.4 3,515,493 + -0.1 3,515,646 - DvMF_2779 0.13 -0.3 3,515,698 - DvMF_2779 0.15 -0.3 3,515,778 + DvMF_2779 0.19 +0.0 3,515,778 + DvMF_2779 0.19 +0.1 3,515,813 + DvMF_2779 0.21 -0.6 3,515,849 + DvMF_2779 0.22 -0.5 3,516,187 - DvMF_2779 0.37 -0.2 3,516,218 - DvMF_2779 0.39 -0.3 3,516,323 - DvMF_2779 0.44 -0.1 3,516,418 - DvMF_2779 0.48 +2.2 3,516,418 - DvMF_2779 0.48 -0.5 3,516,418 - DvMF_2779 0.48 -0.0 3,516,731 - DvMF_2779 0.62 -0.0 3,516,763 - DvMF_2779 0.63 +0.5 3,516,763 - DvMF_2779 0.63 -0.4 3,516,974 + DvMF_2779 0.73 -0.6 3,516,982 - DvMF_2779 0.73 -0.6 3,516,982 - DvMF_2779 0.73 -0.3 3,517,008 + DvMF_2779 0.74 -0.2 3,517,172 - DvMF_2779 0.82 -0.2 3,517,825 + -0.5 3,517,923 + +0.2 3,518,130 + +0.3 3,518,438 - DvMF_2780 0.44 -0.1 3,518,559 - DvMF_2780 0.59 -0.0
Or see this region's nucleotide sequence