Experiment: MoLS4 with Chlorate 3.125 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2627 and DvMF_2628 are separated by 239 nucleotides DvMF_2628 and DvMF_2629 are separated by 237 nucleotides DvMF_2629 and DvMF_2630 are separated by 196 nucleotides
DvMF_2627: DvMF_2627 - transcriptional regulator, TetR family (RefSeq), at 3,318,289 to 3,318,849
_2627
DvMF_2628: DvMF_2628 - hypothetical protein (RefSeq), at 3,319,089 to 3,320,864
_2628
DvMF_2629: DvMF_2629 - Cupin 2 conserved barrel domain protein (RefSeq), at 3,321,102 to 3,321,518
_2629
DvMF_2630: DvMF_2630 - penicillin-binding protein, 1A family (RefSeq), at 3,321,715 to 3,324,138
_2630
Position (kb)
3319
3320
3321 Strain fitness (log2 ratio)
-1
0
1 at 3318.138 kb on + strand at 3318.150 kb on + strand at 3318.654 kb on + strand, within DvMF_2627 at 3318.662 kb on - strand, within DvMF_2627 at 3318.760 kb on + strand, within DvMF_2627 at 3318.821 kb on + strand at 3319.136 kb on - strand at 3319.390 kb on - strand, within DvMF_2628 at 3319.658 kb on + strand, within DvMF_2628 at 3319.991 kb on + strand, within DvMF_2628 at 3319.991 kb on + strand, within DvMF_2628 at 3319.991 kb on + strand, within DvMF_2628 at 3319.991 kb on + strand, within DvMF_2628 at 3319.999 kb on + strand, within DvMF_2628 at 3320.285 kb on - strand, within DvMF_2628 at 3320.412 kb on - strand, within DvMF_2628 at 3320.644 kb on + strand, within DvMF_2628 at 3320.729 kb on - strand at 3320.884 kb on + strand at 3321.008 kb on - strand at 3321.008 kb on - strand at 3321.018 kb on - strand at 3321.101 kb on - strand at 3321.147 kb on + strand, within DvMF_2629 at 3321.192 kb on - strand, within DvMF_2629 at 3321.256 kb on - strand, within DvMF_2629 at 3321.300 kb on + strand, within DvMF_2629 at 3321.343 kb on - strand, within DvMF_2629 at 3321.402 kb on + strand, within DvMF_2629 at 3321.548 kb on + strand at 3321.713 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with Chlorate 3.125 mM remove 3,318,138 + -0.3 3,318,150 + -0.3 3,318,654 + DvMF_2627 0.65 -0.2 3,318,662 - DvMF_2627 0.66 -1.4 3,318,760 + DvMF_2627 0.84 -0.3 3,318,821 + -0.3 3,319,136 - -0.3 3,319,390 - DvMF_2628 0.17 -0.8 3,319,658 + DvMF_2628 0.32 -0.3 3,319,991 + DvMF_2628 0.51 -0.3 3,319,991 + DvMF_2628 0.51 -0.4 3,319,991 + DvMF_2628 0.51 -0.1 3,319,991 + DvMF_2628 0.51 -0.3 3,319,999 + DvMF_2628 0.51 -0.2 3,320,285 - DvMF_2628 0.67 -0.5 3,320,412 - DvMF_2628 0.74 -0.7 3,320,644 + DvMF_2628 0.88 +0.1 3,320,729 - -0.3 3,320,884 + -0.3 3,321,008 - +0.3 3,321,008 - -1.0 3,321,018 - -0.3 3,321,101 - -0.2 3,321,147 + DvMF_2629 0.11 -0.2 3,321,192 - DvMF_2629 0.22 -0.2 3,321,256 - DvMF_2629 0.37 -0.1 3,321,300 + DvMF_2629 0.47 -0.4 3,321,343 - DvMF_2629 0.58 +1.7 3,321,402 + DvMF_2629 0.72 -0.4 3,321,548 + -0.2 3,321,713 + -0.1
Or see this region's nucleotide sequence