Experiment: MoLS4 with Chlorate 3.125 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1956 and DvMF_1957 are separated by 611 nucleotides DvMF_1957 and potC overlap by 1 nucleotides potC and DvMF_1959 are separated by 1 nucleotides
DvMF_1956: DvMF_1956 - Aldehyde ferredoxin oxidoreductase (RefSeq), at 2,416,439 to 2,418,166
_1956
DvMF_1957: DvMF_1957 - extracellular solute-binding protein family 1 (RefSeq), at 2,418,778 to 2,419,854
_1957
DvMF_1958: potC - spermidine/putrescine ABC transporter membrane protein (RefSeq), at 2,419,854 to 2,420,654
potC
DvMF_1959: DvMF_1959 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 2,420,656 to 2,421,624
_1959
Position (kb)
2418
2419
2420 Strain fitness (log2 ratio)
-1
0
1 at 2417.806 kb on - strand, within DvMF_1956 at 2417.859 kb on + strand, within DvMF_1956 at 2418.091 kb on + strand at 2418.175 kb on + strand at 2418.347 kb on + strand at 2418.678 kb on + strand at 2418.924 kb on - strand, within DvMF_1957 at 2418.924 kb on - strand, within DvMF_1957 at 2418.947 kb on - strand, within DvMF_1957 at 2418.949 kb on + strand, within DvMF_1957 at 2419.048 kb on - strand, within DvMF_1957 at 2419.128 kb on - strand, within DvMF_1957 at 2419.435 kb on + strand, within DvMF_1957 at 2419.476 kb on + strand, within DvMF_1957 at 2419.604 kb on + strand, within DvMF_1957 at 2419.612 kb on - strand, within DvMF_1957 at 2419.621 kb on - strand, within DvMF_1957 at 2419.654 kb on + strand, within DvMF_1957 at 2419.663 kb on - strand, within DvMF_1957 at 2419.898 kb on + strand at 2419.906 kb on - strand at 2420.043 kb on - strand, within potC at 2420.144 kb on - strand, within potC at 2420.205 kb on + strand, within potC at 2420.210 kb on + strand, within potC at 2420.402 kb on - strand, within potC at 2420.454 kb on + strand, within potC at 2420.555 kb on + strand, within potC at 2420.589 kb on - strand at 2420.589 kb on - strand at 2420.595 kb on + strand at 2420.603 kb on - strand at 2420.656 kb on - strand at 2420.668 kb on - strand at 2420.787 kb on + strand, within DvMF_1959 at 2420.850 kb on - strand, within DvMF_1959
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with Chlorate 3.125 mM remove 2,417,806 - DvMF_1956 0.79 +1.1 2,417,859 + DvMF_1956 0.82 +0.3 2,418,091 + +1.0 2,418,175 + +0.7 2,418,347 + +1.6 2,418,678 + +0.1 2,418,924 - DvMF_1957 0.14 -0.0 2,418,924 - DvMF_1957 0.14 -0.2 2,418,947 - DvMF_1957 0.16 +0.0 2,418,949 + DvMF_1957 0.16 +0.0 2,419,048 - DvMF_1957 0.25 -0.0 2,419,128 - DvMF_1957 0.32 -0.5 2,419,435 + DvMF_1957 0.61 -0.3 2,419,476 + DvMF_1957 0.65 -0.4 2,419,604 + DvMF_1957 0.77 +0.6 2,419,612 - DvMF_1957 0.77 +0.4 2,419,621 - DvMF_1957 0.78 -0.2 2,419,654 + DvMF_1957 0.81 +0.2 2,419,663 - DvMF_1957 0.82 -0.1 2,419,898 + -0.3 2,419,906 - -0.1 2,420,043 - potC DvMF_1958 0.24 -0.5 2,420,144 - potC DvMF_1958 0.36 -1.3 2,420,205 + potC DvMF_1958 0.44 -0.2 2,420,210 + potC DvMF_1958 0.44 -0.3 2,420,402 - potC DvMF_1958 0.68 -0.4 2,420,454 + potC DvMF_1958 0.75 -0.4 2,420,555 + potC DvMF_1958 0.88 -0.1 2,420,589 - +0.1 2,420,589 - -0.3 2,420,595 + +0.1 2,420,603 - +0.2 2,420,656 - -0.4 2,420,668 - -0.5 2,420,787 + DvMF_1959 0.14 +0.1 2,420,850 - DvMF_1959 0.20 -0.2
Or see this region's nucleotide sequence