Experiment: MoLS4 with Chlorate 3.125 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0543 and DvMF_0544 are separated by 317 nucleotides DvMF_0544 and DvMF_0545 overlap by 4 nucleotides
DvMF_0543: DvMF_0543 - sodium/hydrogen exchanger (RefSeq), at 638,633 to 640,528
_0543
DvMF_0544: DvMF_0544 - glutamate synthase alpha subunit domain protein (RefSeq), at 640,846 to 641,691
_0544
DvMF_0545: DvMF_0545 - glutamine amidotransferase class-II (RefSeq), at 641,688 to 642,797
_0545
Position (kb) 640
641
642 Strain fitness (log2 ratio) -1
0
1 at 639.885 kb on + strand, within DvMF_0543 at 639.939 kb on - strand, within DvMF_0543 at 639.954 kb on - strand, within DvMF_0543 at 640.185 kb on + strand, within DvMF_0543 at 640.196 kb on + strand, within DvMF_0543 at 640.469 kb on + strand at 640.534 kb on + strand at 640.544 kb on + strand at 640.544 kb on + strand at 640.621 kb on + strand at 640.801 kb on + strand at 640.809 kb on - strand at 640.886 kb on + strand at 640.900 kb on - strand at 641.064 kb on + strand, within DvMF_0544 at 641.106 kb on - strand, within DvMF_0544 at 641.341 kb on - strand, within DvMF_0544 at 641.346 kb on - strand, within DvMF_0544 at 641.573 kb on - strand, within DvMF_0544 at 641.584 kb on - strand, within DvMF_0544 at 641.584 kb on - strand, within DvMF_0544 at 641.647 kb on - strand at 641.840 kb on + strand, within DvMF_0545 at 641.933 kb on - strand, within DvMF_0545 at 641.989 kb on + strand, within DvMF_0545 at 642.033 kb on - strand, within DvMF_0545 at 642.180 kb on - strand, within DvMF_0545 at 642.588 kb on - strand, within DvMF_0545 at 642.598 kb on + strand, within DvMF_0545
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with Chlorate 3.125 mM remove 639,885 + DvMF_0543 0.66 -0.2 639,939 - DvMF_0543 0.69 -0.3 639,954 - DvMF_0543 0.70 -0.0 640,185 + DvMF_0543 0.82 -0.3 640,196 + DvMF_0543 0.82 -0.5 640,469 + -0.7 640,534 + -0.3 640,544 + -0.0 640,544 + -0.4 640,621 + -0.4 640,801 + -0.4 640,809 - -0.5 640,886 + -0.6 640,900 - -0.2 641,064 + DvMF_0544 0.26 -0.6 641,106 - DvMF_0544 0.31 -0.7 641,341 - DvMF_0544 0.59 +0.1 641,346 - DvMF_0544 0.59 -0.4 641,573 - DvMF_0544 0.86 +0.7 641,584 - DvMF_0544 0.87 -0.2 641,584 - DvMF_0544 0.87 -0.7 641,647 - -0.8 641,840 + DvMF_0545 0.14 -1.1 641,933 - DvMF_0545 0.22 -0.4 641,989 + DvMF_0545 0.27 -0.2 642,033 - DvMF_0545 0.31 -1.0 642,180 - DvMF_0545 0.44 -0.3 642,588 - DvMF_0545 0.81 -1.5 642,598 + DvMF_0545 0.82 -0.6
Or see this region's nucleotide sequence