Strain Fitness in Xanthomonas campestris pv. campestris strain 8004 around Xcc-8004.370.1

Experiment: Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X
351,528	-				+1.2
351,669	+		Xcc-8004.367.1	0.22	+0.6
351,669	+		Xcc-8004.367.1	0.22	-0.2
351,715	-		Xcc-8004.367.1	0.34	-0.8
351,778	+		Xcc-8004.367.1	0.52	-0.9
351,779	-		Xcc-8004.367.1	0.52	-0.0
351,779	-		Xcc-8004.367.1	0.52	+0.2
351,856	-		Xcc-8004.367.1	0.73	+0.3
351,856	-		Xcc-8004.367.1	0.73	+0.3
351,856	-		Xcc-8004.367.1	0.73	-1.1
351,856	-		Xcc-8004.367.1	0.73	+0.4
351,856	-		Xcc-8004.367.1	0.73	-0.2
351,900	+		Xcc-8004.367.1	0.85	-1.2
351,965	-				-0.6
352,087	-		Xcc-8004.368.1	0.74	+1.3
352,582	+				-2.6
352,582	+				-1.3
352,582	+				+1.0
352,583	-				+0.9
352,644	-				-0.2
352,669	-				+1.1
352,669	-				+1.0
352,689	+				+1.0
352,690	-				+0.9
352,757	-				-0.4
352,851	+				-1.6
353,139	+		Xcc-8004.371.1	0.20	+0.9
353,139	+		Xcc-8004.371.1	0.20	-0.8
353,354	-		Xcc-8004.371.1	0.38	+1.7
353,398	-		Xcc-8004.371.1	0.42	-0.9
353,401	+		Xcc-8004.371.1	0.42	-1.0
353,401	+		Xcc-8004.371.1	0.42	-0.0
353,401	+		Xcc-8004.371.1	0.42	+0.1
353,401	+		Xcc-8004.371.1	0.42	-1.7
353,401	+		Xcc-8004.371.1	0.42	+0.1
353,402	-		Xcc-8004.371.1	0.42	+0.1
353,402	-		Xcc-8004.371.1	0.42	-1.3
353,402	-		Xcc-8004.371.1	0.42	-0.4
353,402	-		Xcc-8004.371.1	0.42	-0.3
353,402	-		Xcc-8004.371.1	0.42	-0.6