Strain Fitness in Xanthomonas campestris pv. campestris strain 8004 around Xcc-8004.1085.1

Experiment: Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X
1,039,138	+				+0.5
1,039,348	+		Xcc-8004.1085.1	0.41	+0.5
1,039,349	-		Xcc-8004.1085.1	0.41	+0.3
1,039,374	+		Xcc-8004.1085.1	0.47	+2.0
1,039,375	-		Xcc-8004.1085.1	0.47	-1.2
1,039,776	+		Xcc-8004.1086.1	0.30	-0.5
1,039,830	-		Xcc-8004.1086.1	0.40	+0.3
1,040,055	+		Xcc-8004.1086.1	0.82	+0.4
1,040,055	+		Xcc-8004.1086.1	0.82	-1.1
1,040,141	+				-0.2
1,040,141	+				-0.3
1,040,142	-				-0.6
1,040,142	-				-0.6
1,040,210	+				-0.7
1,040,214	+				-1.3
1,040,286	+				-1.6
1,040,322	+				-0.1
1,040,323	-				-0.8
1,040,365	+				-1.0
1,040,365	+				-0.3
1,040,365	+				-1.7
1,040,402	-				+0.2
1,040,402	-				-0.4