Experiment: MoLS4 with Chlorate 6.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2926 and garR are separated by 422 nucleotides garR and DvMF_2928 are separated by 79 nucleotides
DvMF_2926: DvMF_2926 - beta-lactamase domain protein (RefSeq), at 3,696,045 to 3,697,706
_2926
DvMF_2927: garR - tartronate semialdehyde reductase (RefSeq), at 3,698,129 to 3,699,028
garR
DvMF_2928: DvMF_2928 - Methicillin resistance protein (RefSeq), at 3,699,108 to 3,700,340
_2928
Position (kb)
3698
3699
3700 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3697.270 kb on - strand, within DvMF_2926 at 3697.355 kb on + strand, within DvMF_2926 at 3697.453 kb on + strand, within DvMF_2926 at 3697.453 kb on + strand, within DvMF_2926 at 3697.680 kb on + strand at 3697.731 kb on + strand at 3697.757 kb on + strand at 3697.967 kb on - strand at 3698.126 kb on - strand at 3698.152 kb on + strand at 3698.395 kb on + strand, within garR at 3698.606 kb on - strand, within garR at 3698.818 kb on + strand, within garR at 3698.961 kb on + strand at 3698.969 kb on - strand at 3699.038 kb on - strand at 3699.076 kb on + strand at 3699.203 kb on - strand at 3699.296 kb on - strand, within DvMF_2928 at 3699.323 kb on - strand, within DvMF_2928 at 3699.346 kb on - strand, within DvMF_2928 at 3699.352 kb on + strand, within DvMF_2928 at 3699.352 kb on + strand, within DvMF_2928 at 3699.392 kb on + strand, within DvMF_2928 at 3699.526 kb on - strand, within DvMF_2928 at 3699.562 kb on - strand, within DvMF_2928 at 3699.572 kb on + strand, within DvMF_2928 at 3699.651 kb on - strand, within DvMF_2928 at 3699.704 kb on + strand, within DvMF_2928 at 3699.712 kb on - strand, within DvMF_2928 at 3699.798 kb on - strand, within DvMF_2928 at 3699.849 kb on + strand, within DvMF_2928 at 3699.857 kb on - strand, within DvMF_2928 at 3699.869 kb on + strand, within DvMF_2928 at 3699.976 kb on - strand, within DvMF_2928
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with Chlorate 6.25 mM remove 3,697,270 - DvMF_2926 0.74 +1.3 3,697,355 + DvMF_2926 0.79 +1.6 3,697,453 + DvMF_2926 0.85 +1.7 3,697,453 + DvMF_2926 0.85 +1.3 3,697,680 + +2.2 3,697,731 + +0.8 3,697,757 + +1.6 3,697,967 - -1.9 3,698,126 - -3.5 3,698,152 + -0.7 3,698,395 + garR DvMF_2927 0.30 -2.4 3,698,606 - garR DvMF_2927 0.53 -2.1 3,698,818 + garR DvMF_2927 0.77 -0.4 3,698,961 + -2.0 3,698,969 - -0.4 3,699,038 - -0.4 3,699,076 + -0.5 3,699,203 - -0.1 3,699,296 - DvMF_2928 0.15 -0.7 3,699,323 - DvMF_2928 0.17 -0.5 3,699,346 - DvMF_2928 0.19 -0.7 3,699,352 + DvMF_2928 0.20 -0.4 3,699,352 + DvMF_2928 0.20 -1.1 3,699,392 + DvMF_2928 0.23 +0.3 3,699,526 - DvMF_2928 0.34 -1.6 3,699,562 - DvMF_2928 0.37 -1.4 3,699,572 + DvMF_2928 0.38 -0.9 3,699,651 - DvMF_2928 0.44 -1.2 3,699,704 + DvMF_2928 0.48 -0.7 3,699,712 - DvMF_2928 0.49 -0.8 3,699,798 - DvMF_2928 0.56 +0.1 3,699,849 + DvMF_2928 0.60 -2.9 3,699,857 - DvMF_2928 0.61 -0.8 3,699,869 + DvMF_2928 0.62 +0.1 3,699,976 - DvMF_2928 0.70 -1.9
Or see this region's nucleotide sequence