Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2713

Experiment: MoLS4 with Chlorate 6.25 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDvMF_2712 and DvMF_2713 are separated by 171 nucleotidesDvMF_2713 and DvMF_2714 are separated by 15 nucleotides DvMF_2712: DvMF_2712 - methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor (RefSeq), at 3,432,551 to 3,434,572 _2712 DvMF_2713: DvMF_2713 - 4Fe-4S ferredoxin iron-sulfur binding domain protein (RefSeq), at 3,434,744 to 3,436,714 _2713 DvMF_2714: DvMF_2714 - protein of unknown function DUF362 (RefSeq), at 3,436,730 to 3,437,710 _2714 Position (kb) 3434 3435 3436 3437Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 3433.954 kb on - strand, within DvMF_2712at 3434.228 kb on + strand, within DvMF_2712at 3434.345 kb on - strand, within DvMF_2712at 3434.364 kb on + strand, within DvMF_2712at 3434.453 kb on - strandat 3434.581 kb on + strandat 3435.007 kb on - strand, within DvMF_2713at 3435.040 kb on - strand, within DvMF_2713at 3435.126 kb on + strand, within DvMF_2713at 3435.707 kb on - strand, within DvMF_2713at 3435.845 kb on - strand, within DvMF_2713at 3435.870 kb on + strand, within DvMF_2713at 3435.880 kb on + strand, within DvMF_2713at 3435.951 kb on + strand, within DvMF_2713at 3436.136 kb on + strand, within DvMF_2713at 3436.238 kb on - strand, within DvMF_2713at 3436.318 kb on - strand, within DvMF_2713at 3436.347 kb on - strand, within DvMF_2713at 3436.421 kb on + strand, within DvMF_2713at 3436.421 kb on + strand, within DvMF_2713at 3436.451 kb on + strand, within DvMF_2713at 3436.565 kb on + strandat 3436.639 kb on - strandat 3436.773 kb on - strandat 3436.907 kb on + strand, within DvMF_2714at 3437.234 kb on - strand, within DvMF_2714at 3437.323 kb on - strand, within DvMF_2714at 3437.463 kb on + strand, within DvMF_2714at 3437.495 kb on + strand, within DvMF_2714at 3437.528 kb on - strand, within DvMF_2714at 3437.544 kb on - strand, within DvMF_2714at 3437.544 kb on - strand, within DvMF_2714

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Per-strain Table

Position Strand Gene LocusTag Fraction MoLS4 with Chlorate 6.25 mM
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3,433,954 - DvMF_2712 0.69 -0.7
3,434,228 + DvMF_2712 0.83 -0.8
3,434,345 - DvMF_2712 0.89 -0.6
3,434,364 + DvMF_2712 0.90 -0.0
3,434,453 - -0.1
3,434,581 + +0.5
3,435,007 - DvMF_2713 0.13 +0.1
3,435,040 - DvMF_2713 0.15 +0.5
3,435,126 + DvMF_2713 0.19 -2.7
3,435,707 - DvMF_2713 0.49 +0.7
3,435,845 - DvMF_2713 0.56 -1.3
3,435,870 + DvMF_2713 0.57 +0.5
3,435,880 + DvMF_2713 0.58 -0.4
3,435,951 + DvMF_2713 0.61 -2.8
3,436,136 + DvMF_2713 0.71 +0.0
3,436,238 - DvMF_2713 0.76 -0.9
3,436,318 - DvMF_2713 0.80 -1.2
3,436,347 - DvMF_2713 0.81 -2.3
3,436,421 + DvMF_2713 0.85 -0.5
3,436,421 + DvMF_2713 0.85 +0.2
3,436,451 + DvMF_2713 0.87 -0.3
3,436,565 + -0.0
3,436,639 - -0.1
3,436,773 - -0.7
3,436,907 + DvMF_2714 0.18 -0.5
3,437,234 - DvMF_2714 0.51 -1.5
3,437,323 - DvMF_2714 0.60 +0.7
3,437,463 + DvMF_2714 0.75 -0.9
3,437,495 + DvMF_2714 0.78 +0.9
3,437,528 - DvMF_2714 0.81 -1.4
3,437,544 - DvMF_2714 0.83 -1.8
3,437,544 - DvMF_2714 0.83 +2.2

Or see this region's nucleotide sequence