Experiment: MoLS4 with Chlorate 6.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2668 and rnhA are separated by 90 nucleotides rnhA and DvMF_2670 are separated by 119 nucleotides DvMF_2670 and DvMF_2671 are separated by 12 nucleotides
DvMF_2668: DvMF_2668 - type IV pilus assembly PilZ (RefSeq), at 3,371,117 to 3,371,827
_2668
DvMF_2669: rnhA - ribonuclease H (RefSeq), at 3,371,918 to 3,372,388
rnhA
DvMF_2670: DvMF_2670 - hypothetical protein (RefSeq), at 3,372,508 to 3,373,029
_2670
DvMF_2671: DvMF_2671 - Aldehyde ferredoxin oxidoreductase (RefSeq), at 3,373,042 to 3,374,847
_2671
Position (kb)
3371
3372
3373 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 3370.934 kb on - strand at 3371.022 kb on - strand at 3371.148 kb on + strand at 3371.172 kb on + strand at 3371.311 kb on + strand, within DvMF_2668 at 3371.967 kb on - strand, within rnhA at 3372.188 kb on - strand, within rnhA at 3372.188 kb on - strand, within rnhA at 3372.195 kb on - strand, within rnhA at 3372.212 kb on - strand, within rnhA at 3372.265 kb on + strand, within rnhA at 3372.265 kb on + strand, within rnhA at 3372.533 kb on - strand at 3372.545 kb on - strand at 3372.628 kb on + strand, within DvMF_2670 at 3372.710 kb on - strand, within DvMF_2670 at 3372.725 kb on - strand, within DvMF_2670 at 3372.759 kb on + strand, within DvMF_2670 at 3372.767 kb on - strand, within DvMF_2670 at 3372.767 kb on - strand, within DvMF_2670 at 3372.767 kb on - strand, within DvMF_2670 at 3372.767 kb on - strand, within DvMF_2670 at 3372.767 kb on - strand, within DvMF_2670 at 3372.785 kb on + strand, within DvMF_2670 at 3372.787 kb on + strand, within DvMF_2670 at 3372.793 kb on - strand, within DvMF_2670 at 3372.806 kb on + strand, within DvMF_2670 at 3372.812 kb on - strand, within DvMF_2670 at 3372.821 kb on + strand, within DvMF_2670 at 3373.207 kb on - strand at 3373.256 kb on + strand, within DvMF_2671 at 3373.265 kb on - strand, within DvMF_2671 at 3373.344 kb on + strand, within DvMF_2671 at 3373.363 kb on + strand, within DvMF_2671
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with Chlorate 6.25 mM remove 3,370,934 - -1.0 3,371,022 - -3.1 3,371,148 + +1.4 3,371,172 + +3.2 3,371,311 + DvMF_2668 0.27 -2.5 3,371,967 - rnhA DvMF_2669 0.10 -2.7 3,372,188 - rnhA DvMF_2669 0.57 -1.8 3,372,188 - rnhA DvMF_2669 0.57 -2.4 3,372,195 - rnhA DvMF_2669 0.59 -1.4 3,372,212 - rnhA DvMF_2669 0.62 -4.2 3,372,265 + rnhA DvMF_2669 0.74 -1.4 3,372,265 + rnhA DvMF_2669 0.74 -0.2 3,372,533 - +0.0 3,372,545 - -0.8 3,372,628 + DvMF_2670 0.23 +1.4 3,372,710 - DvMF_2670 0.39 +0.2 3,372,725 - DvMF_2670 0.42 -0.8 3,372,759 + DvMF_2670 0.48 -2.5 3,372,767 - DvMF_2670 0.50 -0.1 3,372,767 - DvMF_2670 0.50 -0.9 3,372,767 - DvMF_2670 0.50 -3.8 3,372,767 - DvMF_2670 0.50 -0.1 3,372,767 - DvMF_2670 0.50 -0.4 3,372,785 + DvMF_2670 0.53 +0.1 3,372,787 + DvMF_2670 0.53 -1.7 3,372,793 - DvMF_2670 0.55 -0.3 3,372,806 + DvMF_2670 0.57 +0.4 3,372,812 - DvMF_2670 0.58 -0.8 3,372,821 + DvMF_2670 0.60 +0.2 3,373,207 - -0.9 3,373,256 + DvMF_2671 0.12 -0.5 3,373,265 - DvMF_2671 0.12 -0.3 3,373,344 + DvMF_2671 0.17 -2.7 3,373,363 + DvMF_2671 0.18 -2.3
Or see this region's nucleotide sequence