Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2632

Experiment: MoLS4 with Chlorate 6.25 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDvMF_2630 and DvMF_2631 are separated by 11 nucleotidesDvMF_2631 and DvMF_2632 are separated by 1 nucleotidesDvMF_2632 and DvMF_2633 are separated by 535 nucleotides DvMF_2630: DvMF_2630 - penicillin-binding protein, 1A family (RefSeq), at 3,321,715 to 3,324,138 _2630 DvMF_2631: DvMF_2631 - hypothetical protein (RefSeq), at 3,324,150 to 3,324,980 _2631 DvMF_2632: DvMF_2632 - dolichyl-phosphate-mannose-protein mannosyltransferase family protein (RefSeq), at 3,324,982 to 3,326,772 _2632 DvMF_2633: DvMF_2633 - Aldehyde Dehydrogenase (RefSeq), at 3,327,308 to 3,328,690 _2633 Position (kb) 3324 3325 3326 3327Strain fitness (log2 ratio) -2 -1 0 1 2 3at 3324.258 kb on - strand, within DvMF_2631at 3324.305 kb on + strand, within DvMF_2631at 3324.354 kb on - strand, within DvMF_2631at 3324.750 kb on + strand, within DvMF_2631at 3324.780 kb on + strand, within DvMF_2631at 3324.806 kb on + strand, within DvMF_2631at 3324.812 kb on + strand, within DvMF_2631at 3324.834 kb on + strand, within DvMF_2631at 3326.871 kb on - strandat 3326.883 kb on + strandat 3326.908 kb on + strandat 3327.038 kb on - strandat 3327.526 kb on - strand, within DvMF_2633at 3327.644 kb on + strand, within DvMF_2633at 3327.678 kb on - strand, within DvMF_2633at 3327.679 kb on - strand, within DvMF_2633at 3327.699 kb on - strand, within DvMF_2633

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Per-strain Table

Position Strand Gene LocusTag Fraction MoLS4 with Chlorate 6.25 mM
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3,324,258 - DvMF_2631 0.13 -1.5
3,324,305 + DvMF_2631 0.19 -0.4
3,324,354 - DvMF_2631 0.25 +0.5
3,324,750 + DvMF_2631 0.72 -0.9
3,324,780 + DvMF_2631 0.76 -0.3
3,324,806 + DvMF_2631 0.79 -0.0
3,324,812 + DvMF_2631 0.80 +2.9
3,324,834 + DvMF_2631 0.82 -1.1
3,326,871 - -1.0
3,326,883 + -0.6
3,326,908 + -0.6
3,327,038 - -0.8
3,327,526 - DvMF_2633 0.16 +3.5
3,327,644 + DvMF_2633 0.24 -0.8
3,327,678 - DvMF_2633 0.27 +0.7
3,327,679 - DvMF_2633 0.27 -2.0
3,327,699 - DvMF_2633 0.28 +0.3

Or see this region's nucleotide sequence