Experiment: MoLS4 with Chlorate 6.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2333 and DvMF_2334 overlap by 1 nucleotides DvMF_2334 and DvMF_2335 are separated by 219 nucleotides DvMF_2335 and DvMF_2336 are separated by 147 nucleotides
DvMF_2333: DvMF_2333 - integral membrane sensor signal transduction histidine kinase (RefSeq), at 2,940,460 to 2,942,283
_2333
DvMF_2334: DvMF_2334 - response regulator receiver protein (RefSeq), at 2,942,283 to 2,942,738
_2334
DvMF_2335: DvMF_2335 - peptidase M50 (RefSeq), at 2,942,958 to 2,943,632
_2335
DvMF_2336: DvMF_2336 - tryptophanyl-tRNA synthetase (RefSeq), at 2,943,780 to 2,944,769
_2336
Position (kb)
2942
2943
2944 Strain fitness (log2 ratio)
-2
-1
0
1 at 2942.018 kb on + strand, within DvMF_2333 at 2942.026 kb on - strand, within DvMF_2333 at 2942.074 kb on - strand, within DvMF_2333 at 2942.305 kb on - strand at 2942.553 kb on - strand, within DvMF_2334 at 2942.698 kb on + strand at 2942.790 kb on + strand at 2942.812 kb on + strand at 2943.068 kb on - strand, within DvMF_2335 at 2943.246 kb on + strand, within DvMF_2335 at 2943.472 kb on + strand, within DvMF_2335 at 2943.522 kb on + strand, within DvMF_2335 at 2943.571 kb on - strand at 2943.651 kb on + strand at 2943.651 kb on + strand at 2943.651 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with Chlorate 6.25 mM remove 2,942,018 + DvMF_2333 0.85 -0.8 2,942,026 - DvMF_2333 0.86 -0.7 2,942,074 - DvMF_2333 0.88 -1.1 2,942,305 - +0.1 2,942,553 - DvMF_2334 0.59 -2.0 2,942,698 + -1.0 2,942,790 + -2.3 2,942,812 + -2.4 2,943,068 - DvMF_2335 0.16 -1.1 2,943,246 + DvMF_2335 0.43 -1.1 2,943,472 + DvMF_2335 0.76 -1.9 2,943,522 + DvMF_2335 0.84 -1.2 2,943,571 - +0.5 2,943,651 + -0.4 2,943,651 + -0.8 2,943,651 + -0.4
Or see this region's nucleotide sequence