Experiment: MoLS4 with Chlorate 6.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2327 and DvMF_2328 are separated by 336 nucleotides DvMF_2328 and DvMF_2329 are separated by 509 nucleotides
DvMF_2327: DvMF_2327 - pyridine nucleotide-disulfide oxidoreductase family protein (RefSeq), at 2,931,804 to 2,933,087
_2327
DvMF_2328: DvMF_2328 - glycosyl transferase group 1 (RefSeq), at 2,933,424 to 2,936,039
_2328
DvMF_2329: DvMF_2329 - glycosyl transferase family 2 (RefSeq), at 2,936,549 to 2,937,583
_2329
Position (kb)
2933
2934
2935
2936
2937 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2932.543 kb on + strand, within DvMF_2327 at 2932.571 kb on - strand, within DvMF_2327 at 2932.709 kb on - strand, within DvMF_2327 at 2933.203 kb on + strand at 2933.211 kb on - strand at 2933.213 kb on + strand at 2933.216 kb on - strand at 2933.465 kb on - strand at 2933.766 kb on - strand, within DvMF_2328 at 2933.989 kb on + strand, within DvMF_2328 at 2933.989 kb on + strand, within DvMF_2328 at 2933.997 kb on - strand, within DvMF_2328 at 2934.014 kb on + strand, within DvMF_2328 at 2934.125 kb on + strand, within DvMF_2328 at 2934.441 kb on + strand, within DvMF_2328 at 2934.540 kb on - strand, within DvMF_2328 at 2934.879 kb on + strand, within DvMF_2328 at 2934.900 kb on + strand, within DvMF_2328 at 2934.998 kb on - strand, within DvMF_2328 at 2935.103 kb on - strand, within DvMF_2328 at 2935.131 kb on - strand, within DvMF_2328 at 2935.203 kb on + strand, within DvMF_2328 at 2935.232 kb on - strand, within DvMF_2328 at 2935.232 kb on - strand, within DvMF_2328 at 2935.389 kb on + strand, within DvMF_2328 at 2935.483 kb on + strand, within DvMF_2328 at 2935.547 kb on + strand, within DvMF_2328 at 2935.554 kb on + strand, within DvMF_2328 at 2935.555 kb on - strand, within DvMF_2328 at 2935.657 kb on - strand, within DvMF_2328 at 2935.703 kb on - strand, within DvMF_2328 at 2935.905 kb on - strand at 2935.947 kb on + strand at 2935.984 kb on - strand at 2936.138 kb on + strand at 2936.194 kb on - strand at 2936.259 kb on - strand at 2936.261 kb on + strand at 2936.271 kb on - strand at 2936.464 kb on - strand at 2936.728 kb on + strand, within DvMF_2329 at 2936.728 kb on + strand, within DvMF_2329 at 2936.754 kb on + strand, within DvMF_2329 at 2936.899 kb on - strand, within DvMF_2329
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with Chlorate 6.25 mM remove 2,932,543 + DvMF_2327 0.58 -2.8 2,932,571 - DvMF_2327 0.60 -0.9 2,932,709 - DvMF_2327 0.70 -0.8 2,933,203 + -0.9 2,933,211 - -2.9 2,933,213 + +0.3 2,933,216 - +3.5 2,933,465 - -0.1 2,933,766 - DvMF_2328 0.13 -0.3 2,933,989 + DvMF_2328 0.22 -0.5 2,933,989 + DvMF_2328 0.22 -0.4 2,933,997 - DvMF_2328 0.22 -0.5 2,934,014 + DvMF_2328 0.23 +0.9 2,934,125 + DvMF_2328 0.27 -0.8 2,934,441 + DvMF_2328 0.39 -0.8 2,934,540 - DvMF_2328 0.43 -3.2 2,934,879 + DvMF_2328 0.56 -0.8 2,934,900 + DvMF_2328 0.56 -2.8 2,934,998 - DvMF_2328 0.60 -0.7 2,935,103 - DvMF_2328 0.64 -3.4 2,935,131 - DvMF_2328 0.65 -0.3 2,935,203 + DvMF_2328 0.68 -0.0 2,935,232 - DvMF_2328 0.69 +0.2 2,935,232 - DvMF_2328 0.69 -0.8 2,935,389 + DvMF_2328 0.75 -2.1 2,935,483 + DvMF_2328 0.79 -0.0 2,935,547 + DvMF_2328 0.81 -2.9 2,935,554 + DvMF_2328 0.81 +0.1 2,935,555 - DvMF_2328 0.81 -1.2 2,935,657 - DvMF_2328 0.85 -0.7 2,935,703 - DvMF_2328 0.87 -0.1 2,935,905 - -0.6 2,935,947 + -2.7 2,935,984 - -1.0 2,936,138 + -1.9 2,936,194 - +1.5 2,936,259 - -0.7 2,936,261 + -0.3 2,936,271 - -2.1 2,936,464 - -0.4 2,936,728 + DvMF_2329 0.17 -0.8 2,936,728 + DvMF_2329 0.17 -3.1 2,936,754 + DvMF_2329 0.20 -1.2 2,936,899 - DvMF_2329 0.34 +0.9
Or see this region's nucleotide sequence