Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2099

Experiment: MoLS4 with Chlorate 6.25 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDvMF_2098 and DvMF_2099 are separated by 130 nucleotidesDvMF_2099 and DvMF_2100 are separated by 506 nucleotides DvMF_2098: DvMF_2098 - major facilitator superfamily MFS_1 (RefSeq), at 2,614,478 to 2,615,878 _2098 DvMF_2099: DvMF_2099 - glutamine synthetase, type I (RefSeq), at 2,616,009 to 2,617,352 _2099 DvMF_2100: DvMF_2100 - hypothetical protein (RefSeq), at 2,617,859 to 2,618,833 _2100 Position (kb) 2616 2617 2618Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 2615.104 kb on + strand, within DvMF_2098at 2615.137 kb on - strand, within DvMF_2098at 2615.199 kb on + strand, within DvMF_2098at 2615.505 kb on + strand, within DvMF_2098at 2615.540 kb on - strand, within DvMF_2098at 2615.570 kb on + strand, within DvMF_2098at 2615.674 kb on + strand, within DvMF_2098at 2615.682 kb on - strand, within DvMF_2098at 2615.738 kb on - strand, within DvMF_2098at 2615.805 kb on + strandat 2616.247 kb on - strand, within DvMF_2099at 2616.252 kb on - strand, within DvMF_2099at 2616.252 kb on - strand, within DvMF_2099at 2616.432 kb on - strand, within DvMF_2099at 2616.666 kb on + strand, within DvMF_2099at 2616.715 kb on + strand, within DvMF_2099at 2616.723 kb on - strand, within DvMF_2099at 2616.735 kb on + strand, within DvMF_2099at 2617.101 kb on + strand, within DvMF_2099at 2617.248 kb on + strandat 2617.264 kb on + strandat 2617.274 kb on + strandat 2617.491 kb on + strandat 2617.607 kb on + strandat 2617.628 kb on + strandat 2617.631 kb on - strandat 2617.645 kb on - strandat 2617.685 kb on + strandat 2617.693 kb on - strandat 2617.797 kb on - strandat 2617.853 kb on - strandat 2617.855 kb on + strandat 2617.870 kb on - strandat 2617.877 kb on - strandat 2617.925 kb on - strandat 2618.182 kb on + strand, within DvMF_2100at 2618.190 kb on - strand, within DvMF_2100

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Per-strain Table

Position Strand Gene LocusTag Fraction MoLS4 with Chlorate 6.25 mM
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2,615,104 + DvMF_2098 0.45 -1.5
2,615,137 - DvMF_2098 0.47 -1.1
2,615,199 + DvMF_2098 0.51 +0.9
2,615,505 + DvMF_2098 0.73 -0.6
2,615,540 - DvMF_2098 0.76 -3.1
2,615,570 + DvMF_2098 0.78 -2.9
2,615,674 + DvMF_2098 0.85 -0.9
2,615,682 - DvMF_2098 0.86 -1.2
2,615,738 - DvMF_2098 0.90 -0.4
2,615,805 + -1.1
2,616,247 - DvMF_2099 0.18 -2.1
2,616,252 - DvMF_2099 0.18 -2.1
2,616,252 - DvMF_2099 0.18 -0.6
2,616,432 - DvMF_2099 0.31 -0.1
2,616,666 + DvMF_2099 0.49 -3.5
2,616,715 + DvMF_2099 0.53 -3.9
2,616,723 - DvMF_2099 0.53 -2.9
2,616,735 + DvMF_2099 0.54 -0.3
2,617,101 + DvMF_2099 0.81 -2.4
2,617,248 + -1.5
2,617,264 + -1.5
2,617,274 + +0.1
2,617,491 + +0.3
2,617,607 + -2.2
2,617,628 + -0.5
2,617,631 - -0.1
2,617,645 - -1.9
2,617,685 + +0.1
2,617,693 - -1.0
2,617,797 - -0.3
2,617,853 - +0.7
2,617,855 + -1.1
2,617,870 - -2.2
2,617,877 - -0.6
2,617,925 - -1.7
2,618,182 + DvMF_2100 0.33 -0.9
2,618,190 - DvMF_2100 0.34 -2.6

Or see this region's nucleotide sequence