Experiment: MoLS4 with Chlorate 6.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1556 and DvMF_1557 are separated by 461 nucleotides DvMF_1557 and DvMF_1558 are separated by 128 nucleotides DvMF_1558 and DvMF_1559 are separated by 86 nucleotides
DvMF_1556: DvMF_1556 - cobyrinic acid a,c-diamide synthase (RefSeq), at 1,919,938 to 1,921,626
_1556
DvMF_1557: DvMF_1557 - hypothetical protein (RefSeq), at 1,922,088 to 1,922,984
_1557
DvMF_1558: DvMF_1558 - transcriptional regulator, MarR family (RefSeq), at 1,923,113 to 1,923,562
_1558
DvMF_1559: DvMF_1559 - sodium/sulphate symporter (RefSeq), at 1,923,649 to 1,925,157
_1559
Position (kb)
1922
1923 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1922.073 kb on + strand at 1922.117 kb on - strand at 1922.138 kb on + strand at 1922.295 kb on - strand, within DvMF_1557 at 1922.773 kb on - strand, within DvMF_1557 at 1922.856 kb on - strand, within DvMF_1557 at 1922.856 kb on - strand, within DvMF_1557 at 1922.856 kb on - strand, within DvMF_1557 at 1922.937 kb on - strand at 1923.319 kb on - strand, within DvMF_1558 at 1923.584 kb on - strand at 1923.708 kb on - strand at 1923.782 kb on + strand at 1923.782 kb on - strand at 1923.913 kb on + strand, within DvMF_1559
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with Chlorate 6.25 mM remove 1,922,073 + -1.0 1,922,117 - +0.1 1,922,138 + -2.2 1,922,295 - DvMF_1557 0.23 -0.5 1,922,773 - DvMF_1557 0.76 -2.8 1,922,856 - DvMF_1557 0.86 -2.1 1,922,856 - DvMF_1557 0.86 -0.7 1,922,856 - DvMF_1557 0.86 -0.7 1,922,937 - -1.1 1,923,319 - DvMF_1558 0.46 -0.7 1,923,584 - -0.9 1,923,708 - -0.2 1,923,782 + +1.1 1,923,782 - -1.0 1,923,913 + DvMF_1559 0.17 -3.3
Or see this region's nucleotide sequence