Experiment: MoLS4 with Chlorate 6.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1490 and DvMF_1491 are separated by 4 nucleotides DvMF_1491 and DvMF_1492 are separated by 325 nucleotides DvMF_1492 and DvMF_1493 overlap by 1 nucleotides
DvMF_1490: DvMF_1490 - Nitrite reductase (cytochrome; ammonia-forming) (RefSeq), at 1,828,105 to 1,829,694
_1490
DvMF_1491: DvMF_1491 - cytochrome c nitrite reductase small subunit (RefSeq), at 1,829,699 to 1,830,178
_1491
DvMF_1492: DvMF_1492 - multi-sensor hybrid histidine kinase (RefSeq), at 1,830,504 to 1,833,593
_1492
DvMF_1493: DvMF_1493 - two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq), at 1,833,593 to 1,835,533
_1493
Position (kb)
1830
1831
1832
1833
1834 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 1829.643 kb on - strand at 1829.886 kb on + strand, within DvMF_1491 at 1829.896 kb on + strand, within DvMF_1491 at 1829.921 kb on - strand, within DvMF_1491 at 1830.007 kb on - strand, within DvMF_1491 at 1830.490 kb on + strand at 1830.786 kb on + strand at 1830.839 kb on + strand, within DvMF_1492 at 1830.847 kb on - strand, within DvMF_1492 at 1831.167 kb on + strand, within DvMF_1492 at 1831.321 kb on - strand, within DvMF_1492 at 1831.728 kb on - strand, within DvMF_1492 at 1831.819 kb on + strand, within DvMF_1492 at 1832.094 kb on + strand, within DvMF_1492 at 1832.136 kb on + strand, within DvMF_1492 at 1832.339 kb on + strand, within DvMF_1492 at 1833.094 kb on - strand, within DvMF_1492 at 1833.263 kb on - strand, within DvMF_1492 at 1833.319 kb on - strand at 1833.326 kb on - strand at 1833.330 kb on - strand at 1833.451 kb on + strand at 1833.682 kb on - strand at 1833.741 kb on + strand at 1833.749 kb on - strand at 1833.789 kb on - strand, within DvMF_1493 at 1833.876 kb on + strand, within DvMF_1493 at 1834.000 kb on + strand, within DvMF_1493 at 1834.093 kb on + strand, within DvMF_1493 at 1834.265 kb on + strand, within DvMF_1493 at 1834.265 kb on + strand, within DvMF_1493 at 1834.273 kb on - strand, within DvMF_1493 at 1834.331 kb on + strand, within DvMF_1493 at 1834.339 kb on - strand, within DvMF_1493 at 1834.349 kb on - strand, within DvMF_1493 at 1834.449 kb on + strand, within DvMF_1493 at 1834.490 kb on + strand, within DvMF_1493 at 1834.496 kb on - strand, within DvMF_1493
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with Chlorate 6.25 mM remove 1,829,643 - +0.3 1,829,886 + DvMF_1491 0.39 -0.4 1,829,896 + DvMF_1491 0.41 -4.1 1,829,921 - DvMF_1491 0.46 -0.9 1,830,007 - DvMF_1491 0.64 -3.2 1,830,490 + -3.4 1,830,786 + +0.4 1,830,839 + DvMF_1492 0.11 -0.5 1,830,847 - DvMF_1492 0.11 -1.4 1,831,167 + DvMF_1492 0.21 -0.7 1,831,321 - DvMF_1492 0.26 -1.0 1,831,728 - DvMF_1492 0.40 -4.1 1,831,819 + DvMF_1492 0.43 -1.1 1,832,094 + DvMF_1492 0.51 -1.1 1,832,136 + DvMF_1492 0.53 -0.4 1,832,339 + DvMF_1492 0.59 -0.5 1,833,094 - DvMF_1492 0.84 -0.7 1,833,263 - DvMF_1492 0.89 -1.4 1,833,319 - -3.2 1,833,326 - +3.5 1,833,330 - -1.6 1,833,451 + -0.7 1,833,682 - +0.1 1,833,741 + -1.5 1,833,749 - -0.5 1,833,789 - DvMF_1493 0.10 -1.7 1,833,876 + DvMF_1493 0.15 -0.4 1,834,000 + DvMF_1493 0.21 -0.9 1,834,093 + DvMF_1493 0.26 -1.1 1,834,265 + DvMF_1493 0.35 -1.1 1,834,265 + DvMF_1493 0.35 -0.4 1,834,273 - DvMF_1493 0.35 -0.8 1,834,331 + DvMF_1493 0.38 -0.7 1,834,339 - DvMF_1493 0.38 -0.5 1,834,349 - DvMF_1493 0.39 -0.5 1,834,449 + DvMF_1493 0.44 -1.0 1,834,490 + DvMF_1493 0.46 -0.2 1,834,496 - DvMF_1493 0.47 -0.1
Or see this region's nucleotide sequence