Experiment: MoLS4 with Chlorate 6.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1147 and DvMF_1148 are separated by 292 nucleotides DvMF_1148 and DvMF_1149 are separated by 58 nucleotides DvMF_1149 and DvMF_1150 overlap by 4 nucleotides
DvMF_1147: DvMF_1147 - L-lactate permease family protein, putative (RefSeq), at 1,406,413 to 1,407,966
_1147
DvMF_1148: DvMF_1148 - TrkA-N domain protein (RefSeq), at 1,408,259 to 1,410,103
_1148
DvMF_1149: DvMF_1149 - protein of unknown function DUF81 (RefSeq), at 1,410,162 to 1,411,055
_1149
DvMF_1150: DvMF_1150 - alkylhydroperoxidase like protein, AhpD family (RefSeq), at 1,411,052 to 1,411,489
_1150
Position (kb)
1408
1409
1410
1411 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1407.329 kb on + strand, within DvMF_1147 at 1407.337 kb on - strand, within DvMF_1147 at 1407.337 kb on - strand, within DvMF_1147 at 1407.444 kb on + strand, within DvMF_1147 at 1407.465 kb on - strand, within DvMF_1147 at 1407.488 kb on - strand, within DvMF_1147 at 1407.679 kb on - strand, within DvMF_1147 at 1407.742 kb on - strand, within DvMF_1147 at 1407.918 kb on + strand at 1407.948 kb on + strand at 1407.948 kb on + strand at 1407.948 kb on + strand at 1407.948 kb on + strand at 1407.948 kb on + strand at 1407.948 kb on + strand at 1407.956 kb on - strand at 1407.956 kb on - strand at 1407.956 kb on - strand at 1407.956 kb on - strand at 1407.956 kb on - strand at 1407.956 kb on - strand at 1407.956 kb on - strand at 1407.956 kb on - strand at 1407.973 kb on + strand at 1407.980 kb on - strand at 1408.112 kb on + strand at 1408.389 kb on - strand at 1408.399 kb on - strand at 1408.440 kb on - strand at 1408.507 kb on + strand, within DvMF_1148 at 1408.645 kb on - strand, within DvMF_1148 at 1408.682 kb on + strand, within DvMF_1148 at 1408.682 kb on + strand, within DvMF_1148 at 1408.690 kb on - strand, within DvMF_1148 at 1408.690 kb on - strand, within DvMF_1148 at 1408.720 kb on + strand, within DvMF_1148 at 1408.807 kb on + strand, within DvMF_1148 at 1408.940 kb on + strand, within DvMF_1148 at 1408.953 kb on - strand, within DvMF_1148 at 1408.961 kb on + strand, within DvMF_1148 at 1409.087 kb on - strand, within DvMF_1148 at 1409.139 kb on + strand, within DvMF_1148 at 1409.230 kb on + strand, within DvMF_1148 at 1409.230 kb on + strand, within DvMF_1148 at 1409.357 kb on + strand, within DvMF_1148 at 1409.801 kb on - strand, within DvMF_1148 at 1409.848 kb on + strand, within DvMF_1148 at 1409.853 kb on + strand, within DvMF_1148 at 1409.858 kb on + strand, within DvMF_1148 at 1409.907 kb on + strand, within DvMF_1148 at 1409.957 kb on - strand at 1410.023 kb on - strand at 1410.048 kb on - strand at 1410.170 kb on + strand at 1410.219 kb on + strand at 1410.424 kb on + strand, within DvMF_1149 at 1410.626 kb on - strand, within DvMF_1149 at 1410.735 kb on + strand, within DvMF_1149 at 1410.745 kb on + strand, within DvMF_1149 at 1410.775 kb on + strand, within DvMF_1149 at 1410.857 kb on - strand, within DvMF_1149 at 1410.970 kb on - strand at 1411.009 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with Chlorate 6.25 mM remove 1,407,329 + DvMF_1147 0.59 -0.2 1,407,337 - DvMF_1147 0.59 -1.3 1,407,337 - DvMF_1147 0.59 -1.8 1,407,444 + DvMF_1147 0.66 -2.8 1,407,465 - DvMF_1147 0.68 -0.8 1,407,488 - DvMF_1147 0.69 -2.0 1,407,679 - DvMF_1147 0.81 -0.5 1,407,742 - DvMF_1147 0.86 -0.9 1,407,918 + -0.3 1,407,948 + -0.7 1,407,948 + -0.1 1,407,948 + -0.5 1,407,948 + -0.9 1,407,948 + -3.4 1,407,948 + +0.2 1,407,956 - -0.3 1,407,956 - -2.7 1,407,956 - -0.7 1,407,956 - -0.1 1,407,956 - -0.7 1,407,956 - -1.6 1,407,956 - -0.5 1,407,956 - +0.1 1,407,973 + -0.4 1,407,980 - -1.0 1,408,112 + -1.1 1,408,389 - -2.9 1,408,399 - -2.7 1,408,440 - -0.8 1,408,507 + DvMF_1148 0.13 -1.3 1,408,645 - DvMF_1148 0.21 -0.8 1,408,682 + DvMF_1148 0.23 -0.0 1,408,682 + DvMF_1148 0.23 -1.7 1,408,690 - DvMF_1148 0.23 -0.7 1,408,690 - DvMF_1148 0.23 +1.9 1,408,720 + DvMF_1148 0.25 -1.0 1,408,807 + DvMF_1148 0.30 -1.7 1,408,940 + DvMF_1148 0.37 -1.5 1,408,953 - DvMF_1148 0.38 -0.2 1,408,961 + DvMF_1148 0.38 -2.0 1,409,087 - DvMF_1148 0.45 -3.4 1,409,139 + DvMF_1148 0.48 +0.3 1,409,230 + DvMF_1148 0.53 -0.1 1,409,230 + DvMF_1148 0.53 -2.7 1,409,357 + DvMF_1148 0.60 -3.7 1,409,801 - DvMF_1148 0.84 -2.6 1,409,848 + DvMF_1148 0.86 +0.4 1,409,853 + DvMF_1148 0.86 -1.1 1,409,858 + DvMF_1148 0.87 -2.8 1,409,907 + DvMF_1148 0.89 -1.0 1,409,957 - -2.1 1,410,023 - -1.5 1,410,048 - +0.0 1,410,170 + -2.1 1,410,219 + -0.8 1,410,424 + DvMF_1149 0.29 -1.3 1,410,626 - DvMF_1149 0.52 -1.9 1,410,735 + DvMF_1149 0.64 -0.6 1,410,745 + DvMF_1149 0.65 -1.0 1,410,775 + DvMF_1149 0.69 -0.6 1,410,857 - DvMF_1149 0.78 -1.4 1,410,970 - -3.0 1,411,009 - -0.9
Or see this region's nucleotide sequence