Experiment: MoLS4 with Chlorate 6.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1136 and DvMF_1137 are separated by 226 nucleotides DvMF_1137 and DvMF_1138 are separated by 5 nucleotides DvMF_1138 and DvMF_1139 overlap by 1 nucleotides DvMF_1139 and DvMF_1140 are separated by 164 nucleotides
DvMF_1136: DvMF_1136 - Tetratricopeptide domain protein (RefSeq), at 1,394,477 to 1,395,385
_1136
DvMF_1137: DvMF_1137 - orotidine 5'-phosphate decarboxylase (RefSeq), at 1,395,612 to 1,396,364
_1137
DvMF_1138: DvMF_1138 - Guanylate kinase (RefSeq), at 1,396,370 to 1,396,999
_1138
DvMF_1139: DvMF_1139 - hypothetical protein (RefSeq), at 1,396,999 to 1,397,265
_1139
DvMF_1140: DvMF_1140 - hypothetical protein (RefSeq), at 1,397,430 to 1,398,311
_1140
Position (kb)
1396
1397 Strain fitness (log2 ratio)
-2
-1
0
1 at 1395.552 kb on + strand at 1395.689 kb on - strand, within DvMF_1137 at 1395.777 kb on + strand, within DvMF_1137 at 1395.846 kb on + strand, within DvMF_1137 at 1396.012 kb on - strand, within DvMF_1137 at 1396.012 kb on - strand, within DvMF_1137 at 1396.216 kb on - strand, within DvMF_1137 at 1397.177 kb on + strand, within DvMF_1139 at 1397.654 kb on + strand, within DvMF_1140 at 1397.836 kb on + strand, within DvMF_1140
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with Chlorate 6.25 mM remove 1,395,552 + -1.7 1,395,689 - DvMF_1137 0.10 -1.8 1,395,777 + DvMF_1137 0.22 -1.0 1,395,846 + DvMF_1137 0.31 -0.9 1,396,012 - DvMF_1137 0.53 -0.6 1,396,012 - DvMF_1137 0.53 +0.7 1,396,216 - DvMF_1137 0.80 -2.6 1,397,177 + DvMF_1139 0.67 +1.4 1,397,654 + DvMF_1140 0.25 +0.2 1,397,836 + DvMF_1140 0.46 -1.0
Or see this region's nucleotide sequence