Experiment: MoLS4 with Chlorate 6.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0915 and DvMF_0916 are separated by 89 nucleotides DvMF_0916 and DvMF_0917 are separated by 263 nucleotides DvMF_0917 and DvMF_R0023 are separated by 406 nucleotides DvMF_R0023 and DvMF_R0024 are separated by 105 nucleotides
DvMF_0915: DvMF_0915 - SufBD protein (RefSeq), at 1,100,546 to 1,101,712
_0915
DvMF_0916: DvMF_0916 - YCII-related (RefSeq), at 1,101,802 to 1,102,089
_0916
DvMF_0917: DvMF_0917 - methyl-accepting chemotaxis sensory transducer with Cache sensor (RefSeq), at 1,102,353 to 1,104,161
_0917
DvMF_R0023: DvMF_R0023 - 5S ribosomal RNA (RefSeq), at 1,104,568 to 1,104,682
_R0023
DvMF_R0024: DvMF_R0024 - 23S ribosomal RNA (RefSeq), at 1,104,788 to 1,107,713
_R0024
Position (kb)
1102
1103
1104
1105 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1101.744 kb on + strand at 1101.780 kb on - strand at 1101.979 kb on - strand, within DvMF_0916 at 1102.030 kb on - strand, within DvMF_0916 at 1102.082 kb on - strand at 1102.265 kb on + strand at 1102.481 kb on + strand at 1102.510 kb on - strand at 1102.550 kb on - strand, within DvMF_0917 at 1102.649 kb on + strand, within DvMF_0917 at 1102.906 kb on - strand, within DvMF_0917 at 1103.055 kb on - strand, within DvMF_0917 at 1103.195 kb on - strand, within DvMF_0917 at 1103.341 kb on + strand, within DvMF_0917 at 1103.381 kb on - strand, within DvMF_0917 at 1103.441 kb on - strand, within DvMF_0917 at 1103.494 kb on + strand, within DvMF_0917 at 1103.612 kb on + strand, within DvMF_0917 at 1103.766 kb on + strand, within DvMF_0917 at 1103.783 kb on + strand, within DvMF_0917 at 1103.879 kb on - strand, within DvMF_0917 at 1103.977 kb on - strand, within DvMF_0917 at 1103.979 kb on - strand, within DvMF_0917 at 1104.328 kb on + strand at 1104.389 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with Chlorate 6.25 mM remove 1,101,744 + -1.0 1,101,780 - -0.7 1,101,979 - DvMF_0916 0.61 -1.8 1,102,030 - DvMF_0916 0.79 -3.3 1,102,082 - -2.0 1,102,265 + -1.8 1,102,481 + -0.3 1,102,510 - -1.4 1,102,550 - DvMF_0917 0.11 -2.2 1,102,649 + DvMF_0917 0.16 -1.0 1,102,906 - DvMF_0917 0.31 -0.2 1,103,055 - DvMF_0917 0.39 -0.4 1,103,195 - DvMF_0917 0.47 -2.2 1,103,341 + DvMF_0917 0.55 -0.7 1,103,381 - DvMF_0917 0.57 +0.9 1,103,441 - DvMF_0917 0.60 -0.9 1,103,494 + DvMF_0917 0.63 -2.7 1,103,612 + DvMF_0917 0.70 -0.3 1,103,766 + DvMF_0917 0.78 -0.8 1,103,783 + DvMF_0917 0.79 +0.2 1,103,879 - DvMF_0917 0.84 +0.1 1,103,977 - DvMF_0917 0.90 -0.8 1,103,979 - DvMF_0917 0.90 +0.7 1,104,328 + +0.3 1,104,389 - +1.5
Or see this region's nucleotide sequence