Experiment: MoLS4 with Chlorate 6.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0300 and DvMF_0301 are separated by 144 nucleotides DvMF_0301 and DvMF_0302 are separated by 115 nucleotides DvMF_0302 and DvMF_0303 are separated by 25 nucleotides
DvMF_0300: DvMF_0300 - CgeB family protein (RefSeq), at 345,898 to 347,244
_0300
DvMF_0301: DvMF_0301 - extracellular solute-binding protein family 3 (RefSeq), at 347,389 to 348,255
_0301
DvMF_0302: DvMF_0302 - domain of unknown function DUF1737 (RefSeq), at 348,371 to 348,577
_0302
DvMF_0303: DvMF_0303 - methyl-accepting chemotaxis sensory transducer (RefSeq), at 348,603 to 350,378
_0303
Position (kb) 347
348
349 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 346.394 kb on - strand, within DvMF_0300 at 346.439 kb on + strand, within DvMF_0300 at 346.443 kb on + strand, within DvMF_0300 at 346.443 kb on + strand, within DvMF_0300 at 346.449 kb on + strand, within DvMF_0300 at 346.451 kb on - strand, within DvMF_0300 at 346.540 kb on - strand, within DvMF_0300 at 346.590 kb on - strand, within DvMF_0300 at 346.617 kb on - strand, within DvMF_0300 at 346.645 kb on + strand, within DvMF_0300 at 346.786 kb on - strand, within DvMF_0300 at 346.905 kb on + strand, within DvMF_0300 at 347.107 kb on + strand, within DvMF_0300 at 347.179 kb on + strand at 347.350 kb on + strand at 347.407 kb on - strand at 347.461 kb on - strand at 347.490 kb on - strand, within DvMF_0301 at 347.497 kb on + strand, within DvMF_0301 at 347.627 kb on + strand, within DvMF_0301 at 347.668 kb on - strand, within DvMF_0301 at 347.787 kb on - strand, within DvMF_0301 at 347.823 kb on + strand, within DvMF_0301 at 347.835 kb on + strand, within DvMF_0301 at 347.842 kb on + strand, within DvMF_0301 at 347.847 kb on + strand, within DvMF_0301 at 347.855 kb on - strand, within DvMF_0301 at 347.855 kb on - strand, within DvMF_0301 at 347.855 kb on - strand, within DvMF_0301 at 347.958 kb on + strand, within DvMF_0301 at 347.966 kb on - strand, within DvMF_0301 at 348.027 kb on + strand, within DvMF_0301 at 348.046 kb on + strand, within DvMF_0301 at 348.085 kb on + strand, within DvMF_0301 at 348.093 kb on - strand, within DvMF_0301 at 348.093 kb on - strand, within DvMF_0301 at 348.119 kb on - strand, within DvMF_0301 at 348.346 kb on + strand at 348.442 kb on - strand, within DvMF_0302 at 349.082 kb on + strand, within DvMF_0303 at 349.181 kb on + strand, within DvMF_0303
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with Chlorate 6.25 mM remove 346,394 - DvMF_0300 0.37 -2.5 346,439 + DvMF_0300 0.40 +0.6 346,443 + DvMF_0300 0.40 -1.0 346,443 + DvMF_0300 0.40 -0.5 346,449 + DvMF_0300 0.41 +0.2 346,451 - DvMF_0300 0.41 -3.8 346,540 - DvMF_0300 0.48 -3.3 346,590 - DvMF_0300 0.51 -4.4 346,617 - DvMF_0300 0.53 -2.2 346,645 + DvMF_0300 0.55 -3.7 346,786 - DvMF_0300 0.66 -2.0 346,905 + DvMF_0300 0.75 -0.6 347,107 + DvMF_0300 0.90 -1.9 347,179 + -1.1 347,350 + -1.0 347,407 - -2.0 347,461 - -2.2 347,490 - DvMF_0301 0.12 -0.8 347,497 + DvMF_0301 0.12 -0.5 347,627 + DvMF_0301 0.27 -0.2 347,668 - DvMF_0301 0.32 -1.0 347,787 - DvMF_0301 0.46 -0.0 347,823 + DvMF_0301 0.50 -1.1 347,835 + DvMF_0301 0.51 -0.9 347,842 + DvMF_0301 0.52 +0.9 347,847 + DvMF_0301 0.53 -0.8 347,855 - DvMF_0301 0.54 -1.2 347,855 - DvMF_0301 0.54 -0.2 347,855 - DvMF_0301 0.54 -0.3 347,958 + DvMF_0301 0.66 -0.8 347,966 - DvMF_0301 0.67 +3.3 348,027 + DvMF_0301 0.74 -1.6 348,046 + DvMF_0301 0.76 -1.9 348,085 + DvMF_0301 0.80 -0.7 348,093 - DvMF_0301 0.81 -0.8 348,093 - DvMF_0301 0.81 -0.8 348,119 - DvMF_0301 0.84 -0.3 348,346 + -0.7 348,442 - DvMF_0302 0.34 -1.1 349,082 + DvMF_0303 0.27 -1.9 349,181 + DvMF_0303 0.33 -1.0
Or see this region's nucleotide sequence