Strain Fitness in Xanthomonas campestris pv. campestris strain 8004 around Xcc-8004.3557.1

Experiment: Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X
3,446,672	+		Xcc-8004.3555.1	0.79	+0.1
3,446,673	-		Xcc-8004.3555.1	0.79	+0.4
3,447,181	+		Xcc-8004.3556.1	0.50	-1.2
3,447,181	+		Xcc-8004.3556.1	0.50	+0.3
3,447,181	+		Xcc-8004.3556.1	0.50	+0.5
3,447,425	+		Xcc-8004.3556.1	0.87	+0.4
3,447,425	+		Xcc-8004.3556.1	0.87	-0.1
3,447,425	+		Xcc-8004.3556.1	0.87	-1.2
3,447,426	-		Xcc-8004.3556.1	0.87	-0.2
3,447,426	-		Xcc-8004.3556.1	0.87	-0.4
3,447,464	+				+1.1
3,447,464	+				+0.3
3,447,465	-				+0.9
3,447,547	+				+1.1
3,447,573	+				+0.0
3,448,325	+				-1.6
3,448,540	+				+0.3
3,448,540	+				+0.2
3,448,540	+				+0.2
3,448,540	+				+0.1
3,448,540	+				-0.0
3,448,540	+				+0.2
3,448,541	-				+0.1
3,448,541	-				+1.0
3,448,541	-				-0.1
3,448,542	+				+0.5
3,448,542	+				+0.7
3,448,542	+				-0.2
3,448,554	+				+1.9
3,448,554	+				+0.5