Strain Fitness in Pantoea sp. MT58 around IAI47_19000

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50
31,317	+				+0.5
31,317	+				+1.1
31,318	-				-0.5
31,318	-				-0.7
31,318	-				+0.2
31,366	-				+1.1
31,407	-				-0.2
31,407	-				-1.5
31,407	-				+0.1
31,407	-				+0.7
31,440	-				-1.0
31,440	-				-0.5
31,457	+				+1.1
31,457	+				+1.1
31,457	+				+1.0
31,482	+				+0.4
31,482	+				-0.3
31,483	-				-0.9
31,483	-				-0.5
31,483	-				-0.9
31,492	+				+1.0
31,551	+		IAI47_18995	0.17	+1.5
31,551	+		IAI47_18995	0.17	+0.7
31,551	+		IAI47_18995	0.17	+0.1
31,551	+		IAI47_18995	0.17	+0.3
31,551	+		IAI47_18995	0.17	-0.8
31,551	+		IAI47_18995	0.17	+0.6
31,551	+		IAI47_18995	0.17	+0.7
31,551	+		IAI47_18995	0.17	+1.0
31,551	+		IAI47_18995	0.17	+0.2
31,552	-		IAI47_18995	0.17	+1.7
31,552	-		IAI47_18995	0.17	-0.1
31,552	-		IAI47_18995	0.17	+1.0
31,552	-		IAI47_18995	0.17	+0.1
31,552	-		IAI47_18995	0.17	-2.0
31,552	-		IAI47_18995	0.17	+0.3
31,553	+		IAI47_18995	0.18	-0.3
31,554	-		IAI47_18995	0.18	-1.0
31,554	-		IAI47_18995	0.18	+0.2
31,554	-		IAI47_18995	0.18	-1.6
31,554	-		IAI47_18995	0.18	-0.7
31,554	-		IAI47_18995	0.18	+0.5
31,571	+		IAI47_18995	0.20	+0.6
31,571	+		IAI47_18995	0.20	+2.2
31,619	-		IAI47_18995	0.27	-1.0
31,619	-		IAI47_18995	0.27	+1.4
31,637	+		IAI47_18995	0.30	-0.3
31,638	-		IAI47_18995	0.30	+0.0
31,670	-		IAI47_18995	0.34	-1.2
31,670	-		IAI47_18995	0.34	+0.8
31,670	-		IAI47_18995	0.34	-1.6
31,676	+		IAI47_18995	0.35	+0.5
31,691	+		IAI47_18995	0.38	-0.4
31,691	+		IAI47_18995	0.38	+0.2
31,691	+		IAI47_18995	0.38	-0.6
31,691	+		IAI47_18995	0.38	-1.0
31,691	+		IAI47_18995	0.38	+1.3
31,692	-		IAI47_18995	0.38	-0.7
31,692	-		IAI47_18995	0.38	-1.8
31,739	+		IAI47_18995	0.44	+1.2
31,739	+		IAI47_18995	0.44	+0.6
31,740	-		IAI47_18995	0.45	-0.3
31,740	-		IAI47_18995	0.45	-0.5
31,764	-		IAI47_18995	0.48	-0.2
31,764	-		IAI47_18995	0.48	-1.6
31,784	+		IAI47_18995	0.51	-0.3
31,784	+		IAI47_18995	0.51	+0.8
31,784	+		IAI47_18995	0.51	+0.7
31,785	-		IAI47_18995	0.51	-0.9
31,785	-		IAI47_18995	0.51	+0.1
31,785	-		IAI47_18995	0.51	-1.5
31,785	-		IAI47_18995	0.51	-0.4
31,914	+		IAI47_18995	0.70	+2.7
31,915	-		IAI47_18995	0.70	+1.1
31,915	-		IAI47_18995	0.70	-0.2
32,030	+		IAI47_18995	0.86	+0.1
32,031	-		IAI47_18995	0.87	-0.9
32,075	+				-0.5
32,075	+				+1.3
32,075	+				+0.2
32,076	-				+1.4
32,076	-				+0.6
32,076	-				+0.4
32,076	-				-0.7
32,076	-				-0.7
32,076	-				+1.1
32,078	+				+1.1
32,078	+				+1.6
32,078	+				-0.9
32,079	-				-0.6
32,079	-				+1.5
32,079	-				+0.8
32,079	-				-1.2
32,121	+				-1.2
32,121	+				+0.2
32,164	+				+0.9
32,165	-				-0.2
32,169	-				+1.3
32,289	+		IAI47_19000	0.40	+1.9
32,301	+		IAI47_19000	0.44	+1.1
32,301	+		IAI47_19000	0.44	-0.2
32,301	+		IAI47_19000	0.44	+0.0
32,301	+		IAI47_19000	0.44	+0.8
32,301	+		IAI47_19000	0.44	+1.3
32,333	+		IAI47_19000	0.53	-1.0
32,333	+		IAI47_19000	0.53	+0.8
32,333	+		IAI47_19000	0.53	+0.0
32,333	+		IAI47_19000	0.53	+0.3
32,334	-		IAI47_19000	0.54	-0.7
32,334	-		IAI47_19000	0.54	-0.7
32,345	+		IAI47_19000	0.57	+0.7
32,346	-		IAI47_19000	0.57	+1.3
32,393	-		IAI47_19000	0.72	-0.3
32,412	+		IAI47_19000	0.77	-0.5
32,412	+		IAI47_19000	0.77	+1.3
32,412	+		IAI47_19000	0.77	+2.4
32,420	-		IAI47_19000	0.80	+0.1
32,420	-		IAI47_19000	0.80	+1.5
32,420	-		IAI47_19000	0.80	-0.1
32,420	-		IAI47_19000	0.80	+0.7
32,450	+		IAI47_19000	0.89	+0.4
32,450	+		IAI47_19000	0.89	+2.6
32,451	-		IAI47_19000	0.89	+0.5
32,451	-		IAI47_19000	0.89	-0.5
32,474	+				-0.4
32,475	-				+0.1
32,493	+				+1.9
32,494	-				+0.7
32,494	-				+0.5
32,587	+				+0.3
32,595	+				-1.1
32,595	+				+0.6
32,596	-				-0.3
32,610	-				+0.1
32,645	+				+0.3
32,645	+				+0.8
32,645	+				+1.2
32,645	+				+0.1
32,645	+				+0.7
32,646	-				+1.0
32,646	-				+0.3
32,646	-				+0.1
32,659	+				+0.9
32,659	+				-0.0
32,659	+				-0.4
32,660	-				-0.1
32,660	-				+1.1
32,662	+				-0.9
32,662	+				-0.1
32,662	+				-1.1
32,663	-				-1.2
32,663	-				+1.4
32,746	+		IAI47_19005	0.13	+0.1
32,747	-		IAI47_19005	0.13	+0.9
32,783	+		IAI47_19005	0.17	+0.3
32,783	+		IAI47_19005	0.17	+1.7
32,783	+		IAI47_19005	0.17	+0.3
32,784	-		IAI47_19005	0.17	-0.6
32,825	+		IAI47_19005	0.23	+0.8
32,825	+		IAI47_19005	0.23	+1.2
32,825	+		IAI47_19005	0.23	+1.7
32,825	+		IAI47_19005	0.23	+0.3
32,825	+		IAI47_19005	0.23	+0.5
32,825	+		IAI47_19005	0.23	+0.1
32,825	+		IAI47_19005	0.23	+0.7
32,825	+		IAI47_19005	0.23	+0.5
32,826	-		IAI47_19005	0.23	-1.7
32,826	-		IAI47_19005	0.23	-1.5
32,826	-		IAI47_19005	0.23	-0.8
32,826	-		IAI47_19005	0.23	+0.2
32,826	-		IAI47_19005	0.23	+1.3
32,826	-		IAI47_19005	0.23	-0.0
32,826	-		IAI47_19005	0.23	-0.9
32,861	-		IAI47_19005	0.27	+1.3
32,888	-		IAI47_19005	0.30	+2.1
32,927	+		IAI47_19005	0.35	+0.0
32,927	+		IAI47_19005	0.35	+0.2
32,928	-		IAI47_19005	0.35	-0.1
32,953	+		IAI47_19005	0.39	-0.9
32,953	+		IAI47_19005	0.39	-0.1
32,953	+		IAI47_19005	0.39	+0.1
32,953	+		IAI47_19005	0.39	+1.0
32,953	+		IAI47_19005	0.39	+0.5
32,954	-		IAI47_19005	0.39	-0.9
32,954	-		IAI47_19005	0.39	-1.0
32,954	-		IAI47_19005	0.39	+0.6
32,954	-		IAI47_19005	0.39	+0.6
32,958	-		IAI47_19005	0.39	+0.6
32,966	+		IAI47_19005	0.40	+0.0
32,966	+		IAI47_19005	0.40	-1.0
32,966	+		IAI47_19005	0.40	+1.5
32,966	+		IAI47_19005	0.40	-1.5
32,966	+		IAI47_19005	0.40	-0.2
32,966	+		IAI47_19005	0.40	-0.9
32,967	-		IAI47_19005	0.40	+0.8
32,967	-		IAI47_19005	0.40	+0.1
32,967	-		IAI47_19005	0.40	+0.0
32,972	-		IAI47_19005	0.41	+2.5
32,972	-		IAI47_19005	0.41	-0.6
32,972	-		IAI47_19005	0.41	-1.5
32,972	-		IAI47_19005	0.41	+0.5
32,972	-		IAI47_19005	0.41	-0.3
32,972	-		IAI47_19005	0.41	+0.3
32,994	-		IAI47_19005	0.44	+0.3
32,994	-		IAI47_19005	0.44	+0.1
32,994	-		IAI47_19005	0.44	+1.0
33,048	+		IAI47_19005	0.51	-0.7
33,048	+		IAI47_19005	0.51	+0.5
33,049	-		IAI47_19005	0.51	-0.7
33,049	-		IAI47_19005	0.51	-1.1
33,107	+		IAI47_19005	0.58	+0.5
33,108	-		IAI47_19005	0.58	+1.1
33,108	-		IAI47_19005	0.58	+3.3
33,158	+		IAI47_19005	0.64	-2.0
33,159	-		IAI47_19005	0.65	+1.7
33,183	-		IAI47_19005	0.68	+1.5
33,212	+		IAI47_19005	0.71	-0.2
33,212	+		IAI47_19005	0.71	-0.1
33,212	+		IAI47_19005	0.71	-0.9
33,212	+		IAI47_19005	0.71	-0.1
33,212	+		IAI47_19005	0.71	+1.2
33,213	-		IAI47_19005	0.71	+1.5
33,213	-		IAI47_19005	0.71	-0.6
33,213	-		IAI47_19005	0.71	+0.8
33,213	-		IAI47_19005	0.71	-0.8
33,339	+		IAI47_19005	0.87	+1.8
33,339	+		IAI47_19005	0.87	-1.7
33,339	+		IAI47_19005	0.87	+0.7
33,340	-		IAI47_19005	0.87	-1.3
33,340	-		IAI47_19005	0.87	+0.5
33,347	+		IAI47_19005	0.88	+2.5
33,435	+				+0.5
33,436	-				-0.9
33,441	+				+1.5
33,441	+				+0.6
33,442	-				+0.8
33,444	+				-0.1
33,445	-				+0.5
33,445	-				-0.5
33,481	+				-0.1
33,481	+				-0.9
33,481	+				-1.0
33,482	-				+0.1
33,482	-				-1.6
33,482	-				+1.4
33,482	-				+0.3
33,482	-				+0.6