Experiment: perchlorate 100 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24645 and BWI76_RS24650 are separated by 1 nucleotides BWI76_RS24650 and BWI76_RS24655 are separated by 0 nucleotides BWI76_RS24655 and BWI76_RS24660 overlap by 4 nucleotides
BWI76_RS24645: BWI76_RS24645 - autoinducer 2 ABC transporter substrate-binding protein, at 5,135,999 to 5,137,000
_RS24645
BWI76_RS24650: BWI76_RS24650 - putative transport system permease component, at 5,137,002 to 5,137,994
_RS24650
BWI76_RS24655: BWI76_RS24655 - autoinducer 2 ABC transporter permease LsrC, at 5,137,995 to 5,139,029
_RS24655
BWI76_RS24660: BWI76_RS24660 - autoinducer 2 ABC transporter ATP-binding protein LsrA, at 5,139,026 to 5,140,513
_RS24660
Position (kb) 5137
5138
5139
5140 Strain fitness (log2 ratio) -2
-1
0
1 at 5137.044 kb on + strand at 5137.105 kb on + strand, within BWI76_RS24650 at 5137.371 kb on - strand, within BWI76_RS24650 at 5137.549 kb on - strand, within BWI76_RS24650 at 5137.585 kb on + strand, within BWI76_RS24650 at 5137.687 kb on + strand, within BWI76_RS24650 at 5137.970 kb on - strand at 5137.970 kb on - strand at 5138.211 kb on - strand, within BWI76_RS24655 at 5138.512 kb on - strand, within BWI76_RS24655 at 5138.512 kb on - strand, within BWI76_RS24655 at 5138.593 kb on - strand, within BWI76_RS24655 at 5138.593 kb on - strand, within BWI76_RS24655 at 5138.634 kb on - strand, within BWI76_RS24655 at 5138.662 kb on - strand, within BWI76_RS24655 at 5138.771 kb on + strand, within BWI76_RS24655 at 5139.264 kb on - strand, within BWI76_RS24660 at 5139.284 kb on - strand, within BWI76_RS24660 at 5139.517 kb on + strand, within BWI76_RS24660 at 5139.583 kb on - strand, within BWI76_RS24660
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 100 mM remove 5,137,044 + +0.2 5,137,105 + BWI76_RS24650 0.10 +0.9 5,137,371 - BWI76_RS24650 0.37 -0.4 5,137,549 - BWI76_RS24650 0.55 -2.6 5,137,585 + BWI76_RS24650 0.59 +0.7 5,137,687 + BWI76_RS24650 0.69 -0.1 5,137,970 - -0.6 5,137,970 - -0.6 5,138,211 - BWI76_RS24655 0.21 -1.4 5,138,512 - BWI76_RS24655 0.50 -1.1 5,138,512 - BWI76_RS24655 0.50 -2.1 5,138,593 - BWI76_RS24655 0.58 -0.1 5,138,593 - BWI76_RS24655 0.58 -0.0 5,138,634 - BWI76_RS24655 0.62 -1.3 5,138,662 - BWI76_RS24655 0.64 -0.6 5,138,771 + BWI76_RS24655 0.75 -1.4 5,139,264 - BWI76_RS24660 0.16 -0.3 5,139,284 - BWI76_RS24660 0.17 -0.1 5,139,517 + BWI76_RS24660 0.33 +0.0 5,139,583 - BWI76_RS24660 0.37 -0.4
Or see this region's nucleotide sequence