Experiment: perchlorate 100 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS16510 and BWI76_RS16515 are separated by 18 nucleotides BWI76_RS16515 and BWI76_RS16520 are separated by 111 nucleotides
BWI76_RS16510: BWI76_RS16510 - transcriptional repressor PurR, at 3,422,502 to 3,423,527
_RS16510
BWI76_RS16515: BWI76_RS16515 - LysR family transcriptional regulator, at 3,423,546 to 3,424,457
_RS16515
BWI76_RS16520: BWI76_RS16520 - Bcr/CflA family multidrug efflux MFS transporter, at 3,424,569 to 3,425,753
_RS16520
Position (kb)
3423
3424
3425 Strain fitness (log2 ratio)
-1
0
1 at 3422.765 kb on + strand, within BWI76_RS16510 at 3422.766 kb on + strand, within BWI76_RS16510 at 3422.766 kb on + strand, within BWI76_RS16510 at 3423.615 kb on - strand at 3423.615 kb on - strand at 3423.853 kb on + strand, within BWI76_RS16515 at 3424.076 kb on + strand, within BWI76_RS16515 at 3424.390 kb on - strand at 3424.511 kb on + strand at 3424.518 kb on - strand at 3424.519 kb on - strand at 3424.519 kb on - strand at 3424.523 kb on + strand at 3424.530 kb on - strand at 3424.934 kb on + strand, within BWI76_RS16520 at 3425.036 kb on - strand, within BWI76_RS16520 at 3425.116 kb on - strand, within BWI76_RS16520 at 3425.209 kb on - strand, within BWI76_RS16520 at 3425.305 kb on - strand, within BWI76_RS16520 at 3425.341 kb on - strand, within BWI76_RS16520 at 3425.439 kb on + strand, within BWI76_RS16520
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 100 mM remove 3,422,765 + BWI76_RS16510 0.26 +0.2 3,422,766 + BWI76_RS16510 0.26 -1.1 3,422,766 + BWI76_RS16510 0.26 -0.5 3,423,615 - +0.6 3,423,615 - -0.6 3,423,853 + BWI76_RS16515 0.34 -1.4 3,424,076 + BWI76_RS16515 0.58 -1.0 3,424,390 - -0.5 3,424,511 + -0.0 3,424,518 - +0.6 3,424,519 - -0.0 3,424,519 - +0.6 3,424,523 + +0.4 3,424,530 - -0.1 3,424,934 + BWI76_RS16520 0.31 +1.2 3,425,036 - BWI76_RS16520 0.39 +0.6 3,425,116 - BWI76_RS16520 0.46 +1.2 3,425,209 - BWI76_RS16520 0.54 +0.3 3,425,305 - BWI76_RS16520 0.62 -0.7 3,425,341 - BWI76_RS16520 0.65 -0.3 3,425,439 + BWI76_RS16520 0.73 +0.3
Or see this region's nucleotide sequence