Experiment: perchlorate 100 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS09350 and BWI76_RS09355 are separated by 25 nucleotides BWI76_RS09355 and BWI76_RS09360 are separated by 10 nucleotides
BWI76_RS09350: BWI76_RS09350 - hypothetical protein, at 1,961,356 to 1,963,533
_RS09350
BWI76_RS09355: BWI76_RS09355 - hypothetical protein, at 1,963,559 to 1,964,257
_RS09355
BWI76_RS09360: BWI76_RS09360 - hypothetical protein, at 1,964,268 to 1,965,338
_RS09360
Position (kb)
1963
1964
1965 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1962.601 kb on + strand, within BWI76_RS09350 at 1962.790 kb on - strand, within BWI76_RS09350 at 1962.792 kb on + strand, within BWI76_RS09350 at 1962.813 kb on + strand, within BWI76_RS09350 at 1962.834 kb on - strand, within BWI76_RS09350 at 1962.895 kb on + strand, within BWI76_RS09350 at 1962.895 kb on + strand, within BWI76_RS09350 at 1962.907 kb on + strand, within BWI76_RS09350 at 1962.971 kb on + strand, within BWI76_RS09350 at 1962.981 kb on + strand, within BWI76_RS09350 at 1962.981 kb on + strand, within BWI76_RS09350 at 1962.981 kb on + strand, within BWI76_RS09350 at 1962.981 kb on + strand, within BWI76_RS09350 at 1962.981 kb on + strand, within BWI76_RS09350 at 1962.981 kb on + strand, within BWI76_RS09350 at 1962.988 kb on + strand, within BWI76_RS09350 at 1962.989 kb on - strand, within BWI76_RS09350 at 1962.989 kb on - strand, within BWI76_RS09350 at 1962.989 kb on - strand, within BWI76_RS09350 at 1963.005 kb on + strand, within BWI76_RS09350 at 1963.007 kb on + strand, within BWI76_RS09350 at 1963.012 kb on + strand, within BWI76_RS09350 at 1963.015 kb on - strand, within BWI76_RS09350 at 1963.015 kb on - strand, within BWI76_RS09350 at 1963.017 kb on + strand, within BWI76_RS09350 at 1963.026 kb on - strand, within BWI76_RS09350 at 1963.039 kb on + strand, within BWI76_RS09350 at 1963.047 kb on - strand, within BWI76_RS09350 at 1963.047 kb on - strand, within BWI76_RS09350 at 1963.059 kb on + strand, within BWI76_RS09350 at 1963.059 kb on + strand, within BWI76_RS09350 at 1963.059 kb on + strand, within BWI76_RS09350 at 1963.067 kb on - strand, within BWI76_RS09350 at 1963.145 kb on + strand, within BWI76_RS09350 at 1963.145 kb on + strand, within BWI76_RS09350 at 1963.153 kb on - strand, within BWI76_RS09350 at 1963.160 kb on - strand, within BWI76_RS09350 at 1963.163 kb on - strand, within BWI76_RS09350 at 1963.191 kb on + strand, within BWI76_RS09350 at 1963.191 kb on + strand, within BWI76_RS09350 at 1963.191 kb on + strand, within BWI76_RS09350 at 1963.191 kb on + strand, within BWI76_RS09350 at 1963.202 kb on + strand, within BWI76_RS09350 at 1963.204 kb on - strand, within BWI76_RS09350 at 1963.206 kb on + strand, within BWI76_RS09350 at 1963.214 kb on - strand, within BWI76_RS09350 at 1963.329 kb on + strand at 1963.336 kb on + strand at 1963.351 kb on + strand at 1963.407 kb on + strand at 1963.407 kb on + strand at 1963.407 kb on + strand at 1963.407 kb on + strand at 1963.417 kb on - strand at 1963.474 kb on + strand at 1963.489 kb on + strand at 1963.489 kb on + strand at 1963.489 kb on + strand at 1963.489 kb on + strand at 1963.567 kb on + strand at 1963.567 kb on + strand at 1963.575 kb on - strand at 1963.597 kb on + strand at 1963.598 kb on + strand at 1963.604 kb on + strand at 1963.609 kb on + strand at 1963.610 kb on + strand at 1963.610 kb on + strand at 1963.630 kb on - strand, within BWI76_RS09355 at 1963.636 kb on + strand at 1963.639 kb on - strand, within BWI76_RS09355 at 1963.668 kb on + strand, within BWI76_RS09355 at 1963.668 kb on + strand, within BWI76_RS09355 at 1963.668 kb on + strand, within BWI76_RS09355 at 1963.676 kb on - strand, within BWI76_RS09355 at 1963.676 kb on - strand, within BWI76_RS09355 at 1963.676 kb on - strand, within BWI76_RS09355 at 1963.676 kb on - strand, within BWI76_RS09355 at 1963.686 kb on + strand, within BWI76_RS09355 at 1963.690 kb on + strand, within BWI76_RS09355 at 1963.690 kb on + strand, within BWI76_RS09355 at 1963.697 kb on + strand, within BWI76_RS09355 at 1963.707 kb on - strand, within BWI76_RS09355 at 1963.712 kb on + strand, within BWI76_RS09355 at 1963.713 kb on + strand, within BWI76_RS09355 at 1963.720 kb on - strand, within BWI76_RS09355 at 1963.733 kb on + strand, within BWI76_RS09355 at 1963.733 kb on + strand, within BWI76_RS09355 at 1963.735 kb on + strand, within BWI76_RS09355 at 1963.735 kb on + strand, within BWI76_RS09355 at 1963.743 kb on + strand, within BWI76_RS09355 at 1963.759 kb on + strand, within BWI76_RS09355 at 1963.787 kb on - strand, within BWI76_RS09355 at 1963.792 kb on + strand, within BWI76_RS09355 at 1963.792 kb on + strand, within BWI76_RS09355 at 1963.800 kb on - strand, within BWI76_RS09355 at 1963.800 kb on - strand, within BWI76_RS09355 at 1963.800 kb on - strand, within BWI76_RS09355 at 1963.854 kb on - strand, within BWI76_RS09355 at 1963.856 kb on + strand, within BWI76_RS09355 at 1963.877 kb on + strand, within BWI76_RS09355 at 1963.890 kb on + strand, within BWI76_RS09355 at 1963.940 kb on + strand, within BWI76_RS09355 at 1964.165 kb on + strand, within BWI76_RS09355 at 1964.167 kb on + strand, within BWI76_RS09355 at 1964.173 kb on - strand, within BWI76_RS09355 at 1964.177 kb on + strand, within BWI76_RS09355 at 1964.177 kb on + strand, within BWI76_RS09355 at 1964.182 kb on + strand, within BWI76_RS09355 at 1964.196 kb on + strand at 1964.289 kb on + strand at 1964.297 kb on - strand at 1964.510 kb on + strand, within BWI76_RS09360 at 1964.518 kb on - strand, within BWI76_RS09360 at 1964.518 kb on - strand, within BWI76_RS09360 at 1964.541 kb on - strand, within BWI76_RS09360 at 1964.723 kb on - strand, within BWI76_RS09360 at 1964.723 kb on - strand, within BWI76_RS09360 at 1964.925 kb on + strand, within BWI76_RS09360 at 1964.970 kb on - strand, within BWI76_RS09360
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 100 mM remove 1,962,601 + BWI76_RS09350 0.57 -0.1 1,962,790 - BWI76_RS09350 0.66 -0.1 1,962,792 + BWI76_RS09350 0.66 -0.5 1,962,813 + BWI76_RS09350 0.67 -0.5 1,962,834 - BWI76_RS09350 0.68 -0.5 1,962,895 + BWI76_RS09350 0.71 +0.3 1,962,895 + BWI76_RS09350 0.71 +0.0 1,962,907 + BWI76_RS09350 0.71 +1.6 1,962,971 + BWI76_RS09350 0.74 +0.7 1,962,981 + BWI76_RS09350 0.75 +0.2 1,962,981 + BWI76_RS09350 0.75 -0.4 1,962,981 + BWI76_RS09350 0.75 +0.1 1,962,981 + BWI76_RS09350 0.75 -0.7 1,962,981 + BWI76_RS09350 0.75 +0.0 1,962,981 + BWI76_RS09350 0.75 -1.2 1,962,988 + BWI76_RS09350 0.75 +0.3 1,962,989 - BWI76_RS09350 0.75 +1.2 1,962,989 - BWI76_RS09350 0.75 -0.6 1,962,989 - BWI76_RS09350 0.75 +0.7 1,963,005 + BWI76_RS09350 0.76 +0.0 1,963,007 + BWI76_RS09350 0.76 -1.0 1,963,012 + BWI76_RS09350 0.76 -0.5 1,963,015 - BWI76_RS09350 0.76 +0.5 1,963,015 - BWI76_RS09350 0.76 -1.1 1,963,017 + BWI76_RS09350 0.76 +0.7 1,963,026 - BWI76_RS09350 0.77 -0.3 1,963,039 + BWI76_RS09350 0.77 -0.3 1,963,047 - BWI76_RS09350 0.78 -1.8 1,963,047 - BWI76_RS09350 0.78 +0.8 1,963,059 + BWI76_RS09350 0.78 -0.5 1,963,059 + BWI76_RS09350 0.78 -1.1 1,963,059 + BWI76_RS09350 0.78 +0.7 1,963,067 - BWI76_RS09350 0.79 -0.8 1,963,145 + BWI76_RS09350 0.82 -0.0 1,963,145 + BWI76_RS09350 0.82 -0.8 1,963,153 - BWI76_RS09350 0.83 +0.3 1,963,160 - BWI76_RS09350 0.83 -1.7 1,963,163 - BWI76_RS09350 0.83 +1.2 1,963,191 + BWI76_RS09350 0.84 -0.8 1,963,191 + BWI76_RS09350 0.84 +1.3 1,963,191 + BWI76_RS09350 0.84 -0.3 1,963,191 + BWI76_RS09350 0.84 +0.3 1,963,202 + BWI76_RS09350 0.85 +0.7 1,963,204 - BWI76_RS09350 0.85 -0.0 1,963,206 + BWI76_RS09350 0.85 -1.8 1,963,214 - BWI76_RS09350 0.85 -0.3 1,963,329 + +0.2 1,963,336 + -0.1 1,963,351 + +0.9 1,963,407 + +0.2 1,963,407 + +0.0 1,963,407 + -0.2 1,963,407 + +0.4 1,963,417 - +0.2 1,963,474 + +0.4 1,963,489 + +0.3 1,963,489 + -0.7 1,963,489 + -0.4 1,963,489 + -0.6 1,963,567 + -0.7 1,963,567 + -1.7 1,963,575 - +1.0 1,963,597 + -0.7 1,963,598 + +0.3 1,963,604 + +2.3 1,963,609 + +0.3 1,963,610 + +0.1 1,963,610 + +1.3 1,963,630 - BWI76_RS09355 0.10 -0.8 1,963,636 + +0.3 1,963,639 - BWI76_RS09355 0.11 -0.0 1,963,668 + BWI76_RS09355 0.16 -0.3 1,963,668 + BWI76_RS09355 0.16 +1.7 1,963,668 + BWI76_RS09355 0.16 +0.1 1,963,676 - BWI76_RS09355 0.17 -0.9 1,963,676 - BWI76_RS09355 0.17 -1.8 1,963,676 - BWI76_RS09355 0.17 +1.6 1,963,676 - BWI76_RS09355 0.17 -0.8 1,963,686 + BWI76_RS09355 0.18 +0.6 1,963,690 + BWI76_RS09355 0.19 +0.5 1,963,690 + BWI76_RS09355 0.19 -0.9 1,963,697 + BWI76_RS09355 0.20 -0.5 1,963,707 - BWI76_RS09355 0.21 +0.5 1,963,712 + BWI76_RS09355 0.22 -0.8 1,963,713 + BWI76_RS09355 0.22 +0.2 1,963,720 - BWI76_RS09355 0.23 -0.7 1,963,733 + BWI76_RS09355 0.25 -0.3 1,963,733 + BWI76_RS09355 0.25 -0.2 1,963,735 + BWI76_RS09355 0.25 -0.0 1,963,735 + BWI76_RS09355 0.25 +0.6 1,963,743 + BWI76_RS09355 0.26 -0.2 1,963,759 + BWI76_RS09355 0.29 +2.5 1,963,787 - BWI76_RS09355 0.33 -2.1 1,963,792 + BWI76_RS09355 0.33 +2.3 1,963,792 + BWI76_RS09355 0.33 -0.0 1,963,800 - BWI76_RS09355 0.34 +0.3 1,963,800 - BWI76_RS09355 0.34 +0.6 1,963,800 - BWI76_RS09355 0.34 +1.0 1,963,854 - BWI76_RS09355 0.42 -0.6 1,963,856 + BWI76_RS09355 0.42 -0.2 1,963,877 + BWI76_RS09355 0.45 -2.2 1,963,890 + BWI76_RS09355 0.47 +0.1 1,963,940 + BWI76_RS09355 0.55 +0.2 1,964,165 + BWI76_RS09355 0.87 -0.5 1,964,167 + BWI76_RS09355 0.87 +0.3 1,964,173 - BWI76_RS09355 0.88 -0.1 1,964,177 + BWI76_RS09355 0.88 -0.4 1,964,177 + BWI76_RS09355 0.88 -0.3 1,964,182 + BWI76_RS09355 0.89 -0.3 1,964,196 + -0.9 1,964,289 + -0.1 1,964,297 - -0.2 1,964,510 + BWI76_RS09360 0.23 +0.7 1,964,518 - BWI76_RS09360 0.23 -1.2 1,964,518 - BWI76_RS09360 0.23 -0.1 1,964,541 - BWI76_RS09360 0.25 +0.7 1,964,723 - BWI76_RS09360 0.42 -0.7 1,964,723 - BWI76_RS09360 0.42 -0.3 1,964,925 + BWI76_RS09360 0.61 -1.2 1,964,970 - BWI76_RS09360 0.66 +0.6
Or see this region's nucleotide sequence