Experiment: perchlorate 100 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS08640 and BWI76_RS08645 are separated by 143 nucleotides BWI76_RS08645 and BWI76_RS08650 overlap by 1 nucleotides BWI76_RS08650 and BWI76_RS08655 are separated by 2 nucleotides
BWI76_RS08640: BWI76_RS08640 - multidrug efflux pump-associated protein, AcrZ family, at 1,823,030 to 1,823,179
_RS08640
BWI76_RS08645: BWI76_RS08645 - molybdate ABC transporter substrate-binding protein, at 1,823,323 to 1,824,096
_RS08645
BWI76_RS08650: BWI76_RS08650 - molybdate ABC transporter permease, at 1,824,096 to 1,824,785
_RS08650
BWI76_RS08655: BWI76_RS08655 - molybdenum ABC transporter ATP-binding protein, at 1,824,788 to 1,825,846
_RS08655
Position (kb)
1824
1825 Strain fitness (log2 ratio)
-1
0
1
2
3
4
5
6
7 at 1823.226 kb on + strand at 1823.234 kb on - strand at 1823.336 kb on + strand at 1823.433 kb on + strand, within BWI76_RS08645 at 1823.441 kb on - strand, within BWI76_RS08645 at 1823.906 kb on + strand, within BWI76_RS08645 at 1824.126 kb on + strand at 1824.170 kb on - strand, within BWI76_RS08650 at 1824.284 kb on - strand, within BWI76_RS08650 at 1824.809 kb on - strand at 1824.893 kb on + strand at 1824.907 kb on + strand, within BWI76_RS08655 at 1825.150 kb on + strand, within BWI76_RS08655 at 1825.464 kb on - strand, within BWI76_RS08655
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 100 mM remove 1,823,226 + -1.1 1,823,234 - +1.1 1,823,336 + +7.0 1,823,433 + BWI76_RS08645 0.14 +7.1 1,823,441 - BWI76_RS08645 0.15 +7.4 1,823,906 + BWI76_RS08645 0.75 +7.4 1,824,126 + +7.3 1,824,170 - BWI76_RS08650 0.11 +6.9 1,824,284 - BWI76_RS08650 0.27 +6.5 1,824,809 - +7.2 1,824,893 + +7.5 1,824,907 + BWI76_RS08655 0.11 +6.1 1,825,150 + BWI76_RS08655 0.34 +7.2 1,825,464 - BWI76_RS08655 0.64 +0.5
Or see this region's nucleotide sequence