Experiment: perchlorate 100 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS08630 and BWI76_RS08635 are separated by 67 nucleotides BWI76_RS08635 and BWI76_RS08640 are separated by 153 nucleotides BWI76_RS08640 and BWI76_RS08645 are separated by 143 nucleotides
BWI76_RS08630: BWI76_RS08630 - molybdate ABC transporter ATP-binding protein ModF, at 1,820,545 to 1,822,020
_RS08630
BWI76_RS08635: BWI76_RS08635 - molybdenum-dependent transcriptional regulator, at 1,822,088 to 1,822,876
_RS08635
BWI76_RS08640: BWI76_RS08640 - multidrug efflux pump-associated protein, AcrZ family, at 1,823,030 to 1,823,179
_RS08640
BWI76_RS08645: BWI76_RS08645 - molybdate ABC transporter substrate-binding protein, at 1,823,323 to 1,824,096
_RS08645
Position (kb) 1822
1823 Strain fitness (log2 ratio) -1
0
1
2
3
4
5
6
7 at 1821.092 kb on - strand, within BWI76_RS08630 at 1821.555 kb on + strand, within BWI76_RS08630 at 1821.580 kb on + strand, within BWI76_RS08630 at 1821.748 kb on + strand, within BWI76_RS08630 at 1821.952 kb on - strand at 1822.063 kb on - strand at 1822.231 kb on + strand, within BWI76_RS08635 at 1822.565 kb on + strand, within BWI76_RS08635 at 1822.640 kb on + strand, within BWI76_RS08635 at 1822.661 kb on + strand, within BWI76_RS08635 at 1822.711 kb on - strand, within BWI76_RS08635 at 1822.792 kb on - strand, within BWI76_RS08635 at 1822.807 kb on + strand at 1822.959 kb on + strand at 1823.024 kb on - strand at 1823.066 kb on + strand, within BWI76_RS08640 at 1823.226 kb on + strand at 1823.234 kb on - strand at 1823.336 kb on + strand at 1823.433 kb on + strand, within BWI76_RS08645 at 1823.441 kb on - strand, within BWI76_RS08645
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 100 mM remove 1,821,092 - BWI76_RS08630 0.37 +0.5 1,821,555 + BWI76_RS08630 0.68 -0.4 1,821,580 + BWI76_RS08630 0.70 -0.3 1,821,748 + BWI76_RS08630 0.82 +0.5 1,821,952 - -0.2 1,822,063 - +0.2 1,822,231 + BWI76_RS08635 0.18 +3.7 1,822,565 + BWI76_RS08635 0.60 +3.1 1,822,640 + BWI76_RS08635 0.70 +3.9 1,822,661 + BWI76_RS08635 0.73 +2.9 1,822,711 - BWI76_RS08635 0.79 +3.6 1,822,792 - BWI76_RS08635 0.89 +3.4 1,822,807 + +3.9 1,822,959 + -0.0 1,823,024 - +0.3 1,823,066 + BWI76_RS08640 0.24 +0.0 1,823,226 + -1.1 1,823,234 - +1.1 1,823,336 + +7.0 1,823,433 + BWI76_RS08645 0.14 +7.1 1,823,441 - BWI76_RS08645 0.15 +7.4
Or see this region's nucleotide sequence