Experiment: perchlorate 100 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS00890 and BWI76_RS00895 overlap by 56 nucleotides BWI76_RS00895 and BWI76_RS00900 overlap by 20 nucleotides BWI76_RS00900 and BWI76_RS00905 are separated by 126 nucleotides
BWI76_RS00890: BWI76_RS00890 - vitamin B12/cobalamin outer membrane transporter, at 183,449 to 185,317
_RS00890
BWI76_RS00895: BWI76_RS00895 - glutamate racemase, at 185,262 to 186,116
_RS00895
BWI76_RS00900: BWI76_RS00900 - hypothetical protein, at 186,097 to 186,364
_RS00900
BWI76_RS00905: BWI76_RS00905 - 16S ribosomal RNA, at 186,491 to 188,044
_RS00905
Position (kb) 185
186
187 Strain fitness (log2 ratio) -1
0
1
2 at 184.282 kb on + strand, within BWI76_RS00890 at 184.290 kb on + strand, within BWI76_RS00890 at 184.297 kb on + strand, within BWI76_RS00890 at 184.334 kb on - strand, within BWI76_RS00890 at 184.390 kb on + strand, within BWI76_RS00890 at 184.445 kb on + strand, within BWI76_RS00890 at 184.448 kb on - strand, within BWI76_RS00890 at 184.448 kb on - strand, within BWI76_RS00890 at 184.625 kb on + strand, within BWI76_RS00890 at 184.680 kb on + strand, within BWI76_RS00890 at 184.708 kb on - strand, within BWI76_RS00890 at 184.779 kb on - strand, within BWI76_RS00890 at 184.855 kb on + strand, within BWI76_RS00890 at 184.855 kb on + strand, within BWI76_RS00890 at 184.860 kb on + strand, within BWI76_RS00890 at 184.938 kb on - strand, within BWI76_RS00890 at 184.990 kb on + strand, within BWI76_RS00890 at 185.061 kb on - strand, within BWI76_RS00890 at 185.095 kb on + strand, within BWI76_RS00890 at 185.156 kb on - strand at 185.169 kb on + strand at 185.258 kb on + strand at 186.174 kb on + strand, within BWI76_RS00900
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 100 mM remove 184,282 + BWI76_RS00890 0.45 -1.0 184,290 + BWI76_RS00890 0.45 -0.4 184,297 + BWI76_RS00890 0.45 -0.4 184,334 - BWI76_RS00890 0.47 -0.5 184,390 + BWI76_RS00890 0.50 -0.0 184,445 + BWI76_RS00890 0.53 -0.5 184,448 - BWI76_RS00890 0.53 -0.4 184,448 - BWI76_RS00890 0.53 +0.7 184,625 + BWI76_RS00890 0.63 +1.3 184,680 + BWI76_RS00890 0.66 -0.6 184,708 - BWI76_RS00890 0.67 -0.2 184,779 - BWI76_RS00890 0.71 +0.1 184,855 + BWI76_RS00890 0.75 -0.0 184,855 + BWI76_RS00890 0.75 -0.8 184,860 + BWI76_RS00890 0.75 +1.0 184,938 - BWI76_RS00890 0.80 +2.3 184,990 + BWI76_RS00890 0.82 -1.4 185,061 - BWI76_RS00890 0.86 +0.7 185,095 + BWI76_RS00890 0.88 -0.4 185,156 - +0.7 185,169 + -0.4 185,258 + -1.5 186,174 + BWI76_RS00900 0.29 -0.0
Or see this region's nucleotide sequence