Experiment: MoLS4 with Chlorite 12.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_3072 and DvMF_3073 are separated by 321 nucleotides DvMF_3073 and DvMF_3074 are separated by 341 nucleotides
DvMF_3072: DvMF_3072 - two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq), at 3,877,657 to 3,879,486
_3072
DvMF_3073: DvMF_3073 - methyl-accepting chemotaxis sensory transducer (RefSeq), at 3,879,808 to 3,881,841
_3073
DvMF_3074: DvMF_3074 - response regulator receiver modulated metal dependent phosphohydrolase (RefSeq), at 3,882,183 to 3,883,274
_3074
Position (kb)
3879
3880
3881
3882 Strain fitness (log2 ratio)
-1
0
1 at 3878.971 kb on - strand, within DvMF_3072 at 3879.115 kb on - strand, within DvMF_3072 at 3879.222 kb on + strand, within DvMF_3072 at 3879.361 kb on - strand at 3879.531 kb on + strand at 3879.538 kb on + strand at 3879.617 kb on + strand at 3879.889 kb on + strand at 3879.897 kb on - strand at 3879.897 kb on - strand at 3879.937 kb on + strand at 3880.135 kb on + strand, within DvMF_3073 at 3880.355 kb on + strand, within DvMF_3073 at 3880.381 kb on - strand, within DvMF_3073 at 3880.461 kb on - strand, within DvMF_3073 at 3880.471 kb on + strand, within DvMF_3073 at 3880.471 kb on - strand, within DvMF_3073 at 3880.572 kb on + strand, within DvMF_3073 at 3880.635 kb on - strand, within DvMF_3073 at 3880.778 kb on + strand, within DvMF_3073 at 3881.272 kb on + strand, within DvMF_3073 at 3881.280 kb on - strand, within DvMF_3073 at 3881.298 kb on + strand, within DvMF_3073 at 3881.393 kb on - strand, within DvMF_3073 at 3881.393 kb on - strand, within DvMF_3073 at 3881.477 kb on + strand, within DvMF_3073 at 3881.516 kb on + strand, within DvMF_3073 at 3881.987 kb on + strand at 3882.059 kb on + strand at 3882.061 kb on - strand at 3882.276 kb on + strand at 3882.346 kb on - strand, within DvMF_3074 at 3882.538 kb on + strand, within DvMF_3074 at 3882.606 kb on + strand, within DvMF_3074 at 3882.672 kb on - strand, within DvMF_3074 at 3882.711 kb on + strand, within DvMF_3074 at 3882.729 kb on + strand, within DvMF_3074 at 3882.778 kb on + strand, within DvMF_3074 at 3882.813 kb on - strand, within DvMF_3074
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with Chlorite 12.5 mM remove 3,878,971 - DvMF_3072 0.72 +0.4 3,879,115 - DvMF_3072 0.80 +0.6 3,879,222 + DvMF_3072 0.86 -0.3 3,879,361 - -0.1 3,879,531 + -1.2 3,879,538 + +0.1 3,879,617 + -0.3 3,879,889 + -0.8 3,879,897 - +0.2 3,879,897 - -0.4 3,879,937 + +0.4 3,880,135 + DvMF_3073 0.16 -0.8 3,880,355 + DvMF_3073 0.27 +0.1 3,880,381 - DvMF_3073 0.28 -0.5 3,880,461 - DvMF_3073 0.32 -0.1 3,880,471 + DvMF_3073 0.33 -0.7 3,880,471 - DvMF_3073 0.33 -0.6 3,880,572 + DvMF_3073 0.38 -0.5 3,880,635 - DvMF_3073 0.41 +0.0 3,880,778 + DvMF_3073 0.48 -0.1 3,881,272 + DvMF_3073 0.72 -0.5 3,881,280 - DvMF_3073 0.72 -0.3 3,881,298 + DvMF_3073 0.73 -0.6 3,881,393 - DvMF_3073 0.78 -0.2 3,881,393 - DvMF_3073 0.78 -0.5 3,881,477 + DvMF_3073 0.82 -0.3 3,881,516 + DvMF_3073 0.84 -0.7 3,881,987 + -1.0 3,882,059 + -0.5 3,882,061 - +0.2 3,882,276 + -0.7 3,882,346 - DvMF_3074 0.15 -0.5 3,882,538 + DvMF_3074 0.33 -0.7 3,882,606 + DvMF_3074 0.39 +0.3 3,882,672 - DvMF_3074 0.45 +0.1 3,882,711 + DvMF_3074 0.48 -0.2 3,882,729 + DvMF_3074 0.50 -0.2 3,882,778 + DvMF_3074 0.54 -1.0 3,882,813 - DvMF_3074 0.58 -0.3
Or see this region's nucleotide sequence