Experiment: MoLS4 with Chlorite 12.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2536 and DvMF_2537 are separated by 10 nucleotides DvMF_2537 and DvMF_2538 are separated by 342 nucleotides DvMF_2538 and DvMF_2539 are separated by 296 nucleotides
DvMF_2536: DvMF_2536 - two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq), at 3,201,285 to 3,202,718
_2536
DvMF_2537: DvMF_2537 - PAS/PAC sensor hybrid histidine kinase (RefSeq), at 3,202,729 to 3,206,397
_2537
DvMF_2538: DvMF_2538 - hypothetical protein (RefSeq), at 3,206,740 to 3,207,027
_2538
DvMF_2539: DvMF_2539 - PAS/PAC sensor signal transduction histidine kinase (RefSeq), at 3,207,324 to 3,209,369
_2539
Position (kb)
3202
3203
3204
3205
3206
3207 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3202.132 kb on - strand, within DvMF_2536 at 3202.134 kb on + strand, within DvMF_2536 at 3202.142 kb on - strand, within DvMF_2536 at 3202.142 kb on - strand, within DvMF_2536 at 3202.299 kb on + strand, within DvMF_2536 at 3202.312 kb on + strand, within DvMF_2536 at 3202.329 kb on + strand, within DvMF_2536 at 3202.540 kb on - strand, within DvMF_2536 at 3202.805 kb on - strand at 3202.910 kb on - strand at 3202.993 kb on + strand at 3203.046 kb on + strand at 3203.269 kb on - strand, within DvMF_2537 at 3203.285 kb on - strand, within DvMF_2537 at 3203.363 kb on - strand, within DvMF_2537 at 3203.400 kb on + strand, within DvMF_2537 at 3203.617 kb on - strand, within DvMF_2537 at 3203.652 kb on - strand, within DvMF_2537 at 3204.072 kb on + strand, within DvMF_2537 at 3204.080 kb on - strand, within DvMF_2537 at 3204.086 kb on + strand, within DvMF_2537 at 3204.103 kb on + strand, within DvMF_2537 at 3204.214 kb on - strand, within DvMF_2537 at 3204.567 kb on - strand, within DvMF_2537 at 3204.741 kb on + strand, within DvMF_2537 at 3204.759 kb on + strand at 3204.759 kb on + strand, within DvMF_2537 at 3204.759 kb on + strand, within DvMF_2537 at 3204.767 kb on - strand, within DvMF_2537 at 3204.856 kb on + strand, within DvMF_2537 at 3204.856 kb on + strand, within DvMF_2537 at 3204.864 kb on - strand, within DvMF_2537 at 3204.988 kb on + strand, within DvMF_2537 at 3205.041 kb on - strand, within DvMF_2537 at 3205.316 kb on - strand, within DvMF_2537 at 3205.435 kb on + strand, within DvMF_2537 at 3205.504 kb on + strand, within DvMF_2537 at 3206.254 kb on - strand at 3206.361 kb on + strand at 3206.834 kb on + strand, within DvMF_2538 at 3206.837 kb on - strand, within DvMF_2538 at 3206.881 kb on - strand, within DvMF_2538 at 3206.918 kb on + strand, within DvMF_2538 at 3207.062 kb on - strand at 3207.082 kb on + strand at 3207.178 kb on - strand at 3207.192 kb on + strand at 3207.200 kb on - strand at 3207.363 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with Chlorite 12.5 mM remove 3,202,132 - DvMF_2536 0.59 -0.3 3,202,134 + DvMF_2536 0.59 -0.4 3,202,142 - DvMF_2536 0.60 -0.2 3,202,142 - DvMF_2536 0.60 +0.1 3,202,299 + DvMF_2536 0.71 -0.3 3,202,312 + DvMF_2536 0.72 -0.4 3,202,329 + DvMF_2536 0.73 -0.2 3,202,540 - DvMF_2536 0.88 -0.1 3,202,805 - -0.1 3,202,910 - -0.1 3,202,993 + +0.2 3,203,046 + -0.3 3,203,269 - DvMF_2537 0.15 -0.4 3,203,285 - DvMF_2537 0.15 -0.3 3,203,363 - DvMF_2537 0.17 +0.3 3,203,400 + DvMF_2537 0.18 -0.2 3,203,617 - DvMF_2537 0.24 -0.3 3,203,652 - DvMF_2537 0.25 -0.1 3,204,072 + DvMF_2537 0.37 -1.3 3,204,080 - DvMF_2537 0.37 -0.5 3,204,086 + DvMF_2537 0.37 -0.0 3,204,103 + DvMF_2537 0.37 -0.1 3,204,214 - DvMF_2537 0.40 -0.3 3,204,567 - DvMF_2537 0.50 -0.4 3,204,741 + DvMF_2537 0.55 -0.3 3,204,759 + -1.1 3,204,759 + DvMF_2537 0.55 -0.2 3,204,759 + DvMF_2537 0.55 -0.6 3,204,767 - DvMF_2537 0.56 -0.3 3,204,856 + DvMF_2537 0.58 -0.5 3,204,856 + DvMF_2537 0.58 -0.3 3,204,864 - DvMF_2537 0.58 -0.1 3,204,988 + DvMF_2537 0.62 +0.2 3,205,041 - DvMF_2537 0.63 +3.4 3,205,316 - DvMF_2537 0.71 -0.2 3,205,435 + DvMF_2537 0.74 -1.4 3,205,504 + DvMF_2537 0.76 +2.7 3,206,254 - -0.4 3,206,361 + -1.4 3,206,834 + DvMF_2538 0.33 -0.3 3,206,837 - DvMF_2538 0.34 -0.9 3,206,881 - DvMF_2538 0.49 -0.1 3,206,918 + DvMF_2538 0.62 +0.1 3,207,062 - -0.4 3,207,082 + -0.8 3,207,178 - -1.4 3,207,192 + -1.4 3,207,200 - -1.8 3,207,363 - -2.3
Or see this region's nucleotide sequence