Experiment: MoLS4 with Chlorite 12.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2323 and DvMF_2324 are separated by 114 nucleotides DvMF_2324 and DvMF_2325 are separated by 121 nucleotides
DvMF_2323: DvMF_2323 - hypothetical protein (RefSeq), at 2,924,836 to 2,925,915
_2323
DvMF_2324: DvMF_2324 - PAS/PAC sensor hybrid histidine kinase (RefSeq), at 2,926,030 to 2,929,518
_2324
DvMF_2325: DvMF_2325 - ectoine/hydroxyectoine ABC transporter solute-binding protein (RefSeq), at 2,929,640 to 2,930,539
_2325
Position (kb)
2926
2927
2928
2929
2930 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2925.127 kb on - strand, within DvMF_2323 at 2925.255 kb on + strand, within DvMF_2323 at 2925.343 kb on + strand, within DvMF_2323 at 2925.359 kb on + strand, within DvMF_2323 at 2925.537 kb on - strand, within DvMF_2323 at 2925.600 kb on - strand, within DvMF_2323 at 2925.758 kb on + strand, within DvMF_2323 at 2925.962 kb on + strand at 2925.997 kb on + strand at 2926.005 kb on - strand at 2926.050 kb on - strand at 2926.246 kb on + strand at 2926.290 kb on - strand at 2926.290 kb on - strand at 2926.306 kb on + strand at 2926.570 kb on - strand, within DvMF_2324 at 2926.700 kb on - strand, within DvMF_2324 at 2926.831 kb on + strand, within DvMF_2324 at 2926.839 kb on - strand, within DvMF_2324 at 2927.082 kb on - strand, within DvMF_2324 at 2927.342 kb on - strand, within DvMF_2324 at 2927.521 kb on - strand, within DvMF_2324 at 2927.625 kb on + strand, within DvMF_2324 at 2927.692 kb on + strand, within DvMF_2324 at 2927.724 kb on + strand, within DvMF_2324 at 2927.826 kb on - strand, within DvMF_2324 at 2928.046 kb on + strand, within DvMF_2324 at 2928.093 kb on - strand, within DvMF_2324 at 2928.217 kb on - strand, within DvMF_2324 at 2928.247 kb on - strand, within DvMF_2324 at 2928.501 kb on - strand, within DvMF_2324 at 2928.800 kb on - strand, within DvMF_2324 at 2928.895 kb on - strand, within DvMF_2324 at 2928.946 kb on + strand, within DvMF_2324 at 2928.946 kb on + strand, within DvMF_2324 at 2928.954 kb on - strand, within DvMF_2324 at 2929.222 kb on + strand at 2929.230 kb on - strand at 2929.429 kb on + strand at 2929.445 kb on + strand at 2929.527 kb on - strand at 2929.645 kb on + strand at 2929.705 kb on + strand at 2929.916 kb on + strand, within DvMF_2325 at 2929.939 kb on + strand, within DvMF_2325 at 2929.947 kb on - strand, within DvMF_2325 at 2930.009 kb on - strand, within DvMF_2325 at 2930.068 kb on + strand, within DvMF_2325 at 2930.076 kb on - strand, within DvMF_2325 at 2930.284 kb on - strand, within DvMF_2325 at 2930.489 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with Chlorite 12.5 mM remove 2,925,127 - DvMF_2323 0.27 -0.4 2,925,255 + DvMF_2323 0.39 -1.0 2,925,343 + DvMF_2323 0.47 -0.6 2,925,359 + DvMF_2323 0.48 -0.4 2,925,537 - DvMF_2323 0.65 -0.4 2,925,600 - DvMF_2323 0.71 -0.4 2,925,758 + DvMF_2323 0.85 -0.4 2,925,962 + -0.2 2,925,997 + -0.5 2,926,005 - -0.4 2,926,050 - -0.3 2,926,246 + +0.8 2,926,290 - +0.2 2,926,290 - -0.1 2,926,306 + +0.4 2,926,570 - DvMF_2324 0.15 -0.0 2,926,700 - DvMF_2324 0.19 -0.1 2,926,831 + DvMF_2324 0.23 +2.7 2,926,839 - DvMF_2324 0.23 -0.0 2,927,082 - DvMF_2324 0.30 -0.2 2,927,342 - DvMF_2324 0.38 +0.1 2,927,521 - DvMF_2324 0.43 -0.4 2,927,625 + DvMF_2324 0.46 +0.0 2,927,692 + DvMF_2324 0.48 -0.1 2,927,724 + DvMF_2324 0.49 +0.7 2,927,826 - DvMF_2324 0.51 +0.5 2,928,046 + DvMF_2324 0.58 +0.9 2,928,093 - DvMF_2324 0.59 -0.2 2,928,217 - DvMF_2324 0.63 -1.9 2,928,247 - DvMF_2324 0.64 +0.1 2,928,501 - DvMF_2324 0.71 +0.5 2,928,800 - DvMF_2324 0.79 +1.0 2,928,895 - DvMF_2324 0.82 +0.4 2,928,946 + DvMF_2324 0.84 +0.1 2,928,946 + DvMF_2324 0.84 -0.3 2,928,954 - DvMF_2324 0.84 -0.3 2,929,222 + -0.4 2,929,230 - -0.4 2,929,429 + -0.4 2,929,445 + -0.0 2,929,527 - -0.2 2,929,645 + -1.3 2,929,705 + -0.2 2,929,916 + DvMF_2325 0.31 +2.9 2,929,939 + DvMF_2325 0.33 -0.1 2,929,947 - DvMF_2325 0.34 +0.3 2,930,009 - DvMF_2325 0.41 -0.6 2,930,068 + DvMF_2325 0.48 -0.4 2,930,076 - DvMF_2325 0.48 -0.3 2,930,284 - DvMF_2325 0.72 -0.3 2,930,489 - -0.2
Or see this region's nucleotide sequence