Experiment: MoLS4 with Chlorite 12.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2064 and DvMF_2065 are separated by 227 nucleotides DvMF_2065 and DvMF_2066 are separated by 109 nucleotides DvMF_2066 and DvMF_2067 are separated by 543 nucleotides
DvMF_2064: DvMF_2064 - hypothetical protein (RefSeq), at 2,559,794 to 2,560,255
_2064
DvMF_2065: DvMF_2065 - ybaK/ebsC protein (RefSeq), at 2,560,483 to 2,560,947
_2065
DvMF_2066: DvMF_2066 - heavy metal translocating P-type ATPase (RefSeq), at 2,561,057 to 2,563,573
_2066
DvMF_2067: DvMF_2067 - hypothetical protein (RefSeq), at 2,564,117 to 2,565,424
_2067
Position (kb)
2561
2562
2563
2564 Strain fitness (log2 ratio)
-1
0
1
2
3 at 2560.352 kb on - strand at 2560.401 kb on - strand at 2560.512 kb on + strand at 2560.608 kb on - strand, within DvMF_2065 at 2560.809 kb on + strand, within DvMF_2065 at 2560.898 kb on - strand, within DvMF_2065 at 2561.054 kb on + strand at 2561.142 kb on - strand at 2561.142 kb on - strand at 2561.172 kb on - strand at 2561.346 kb on + strand, within DvMF_2066 at 2561.468 kb on + strand, within DvMF_2066 at 2561.561 kb on + strand, within DvMF_2066 at 2561.717 kb on - strand, within DvMF_2066 at 2562.057 kb on + strand, within DvMF_2066 at 2562.120 kb on + strand, within DvMF_2066 at 2562.144 kb on + strand, within DvMF_2066 at 2562.200 kb on + strand, within DvMF_2066 at 2562.618 kb on + strand, within DvMF_2066 at 2562.748 kb on - strand, within DvMF_2066 at 2562.920 kb on + strand, within DvMF_2066 at 2563.224 kb on - strand, within DvMF_2066 at 2563.261 kb on - strand, within DvMF_2066 at 2563.342 kb on + strand at 2563.434 kb on - strand at 2563.436 kb on + strand at 2563.814 kb on + strand at 2564.109 kb on - strand at 2564.176 kb on - strand at 2564.296 kb on + strand, within DvMF_2067 at 2564.303 kb on + strand, within DvMF_2067 at 2564.311 kb on - strand, within DvMF_2067 at 2564.312 kb on - strand, within DvMF_2067 at 2564.414 kb on + strand, within DvMF_2067
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with Chlorite 12.5 mM remove 2,560,352 - +2.7 2,560,401 - -0.4 2,560,512 + -0.2 2,560,608 - DvMF_2065 0.27 -0.7 2,560,809 + DvMF_2065 0.70 -0.4 2,560,898 - DvMF_2065 0.89 -0.3 2,561,054 + -0.7 2,561,142 - +0.9 2,561,142 - -0.2 2,561,172 - -0.3 2,561,346 + DvMF_2066 0.11 -0.5 2,561,468 + DvMF_2066 0.16 -0.3 2,561,561 + DvMF_2066 0.20 -0.3 2,561,717 - DvMF_2066 0.26 -0.3 2,562,057 + DvMF_2066 0.40 +2.8 2,562,120 + DvMF_2066 0.42 -0.9 2,562,144 + DvMF_2066 0.43 -0.0 2,562,200 + DvMF_2066 0.45 +0.0 2,562,618 + DvMF_2066 0.62 -0.1 2,562,748 - DvMF_2066 0.67 -0.3 2,562,920 + DvMF_2066 0.74 +0.1 2,563,224 - DvMF_2066 0.86 -0.0 2,563,261 - DvMF_2066 0.88 -0.3 2,563,342 + -0.9 2,563,434 - -0.5 2,563,436 + +0.1 2,563,814 + +0.3 2,564,109 - -0.3 2,564,176 - +0.2 2,564,296 + DvMF_2067 0.14 -0.6 2,564,303 + DvMF_2067 0.14 -0.8 2,564,311 - DvMF_2067 0.15 -0.4 2,564,312 - DvMF_2067 0.15 -0.4 2,564,414 + DvMF_2067 0.23 -0.4
Or see this region's nucleotide sequence